ncRNA ID | novel_lus_miR696 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1525:599-808 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996369 |
Length | 24 |
Mature sequence(if miRNA) | 187 - AUUUCCAACAUGCAUGACGAAUAU - 210 |
Stem-loop(if miRNA) |
--AUCUGA            C    A       U          C    U   G    UC       A C     CAA   A       UU C   A    C  AA         CGUGUAUGUUGG AAUG CUAAAAA UUAGGUUUCA CAUG UAG CCCU  AAAUAAU G CAAAU   GUU AAAAAUA  U UUA UAUG UA  A         |||||||||||| |||| ||||||| |||||||||| |||| ||| ||||  ||||||| | |||||   ||| |||||||  | ||| |||| ||         GUACGUACAACC UUAC GAUUUUU AGUUCAAAGU GUAC AUU GGGA  UUUAUUA C GUUUA   UAA UUUUUAU  A AAU GUAC AU  C UAUAAGCA            U    C       C          A    C   G    UA       C A     -CA   A       UU A   -    U  AA |
Stem-loop sequence | AUCUGACGUGUAUGUUGGCAAUGACUAAAAAUUUAGGUUUCACCAUGUUAGGCCCUUCAAAUAAUAGCCAAAUCAAGUUAAAAAAUAUUUCUUAAUAUGCUAAAACAAUAUCAUGUAAAAUUUAUUUUUAAAUACAUUUGACCAUUAUUUAUAGGGGUUACCAUGAUGAAACUUGACUUUUUAGCCAUUUCCAACAUGCAUGACGAAUAU |