ncRNA ID | novel_lus_miR686 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1491:188609-188817 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR906804 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AUUUGGCAUGCAUGUUGGAAAUG - 23 |
Stem-loop(if miRNA) |
--A     C            A     -    AA     A     CCAU U A    -  UC   U   U    A             -------GC       CAACAC    UUUGG AUGCAUGUUGGA AUGGC AAAA  UCGAG UUUCG    G G UGCC CU  AAA AAU GUCA AUGAAGUUAAAAA         AUUUGUU      U    ||||| |||||||||||| ||||| ||||  ||||| |||||    | | |||| ||  ||| ||| |||| |||||||||||||         |||||||      A    AAAUU UACGUACAACCU UACCG UUUU  AGUUC AAAGU    C C AUGG GA  UUU UUA CAGU UACUUCAAUUUUU         UGAGCAA      A UAA     U            A     A    GA     -     AAUU - -    A  UA   U   C    C             AGAUUAAAA       CAAUAC |
Stem-loop sequence | AUUUGGCAUGCAUGUUGGAAAUGGCAAAAAAUCGAGAUUUCGCCAUGUGAUGCCCUUCAAAUAAUUGUCAAAUGAAGUUAAAAAGCAUUUGUUCAACACUAACAUAACAACGAGUAAAAUUAGAUUUUUAACUUCAUCUGACCAUUUUUUAUAGAGGUACCUUAAUGAAACUUGAAGUUUUAGCCAUAUCCAACAUGCAUUUUAAAAAU |