ncRNA ID | novel_lus_miR678 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold680:97558-97729 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR906804 |
Length | 23 |
Mature sequence(if miRNA) | 150 - GAGGAUUGAUAAAAUGAUGAGUU - 172 |
Stem-loop(if miRNA) |
--            AA  -  -  --       AAAUUG  UU          --G    - AUGAUAUACUUGAACGGUAGAGGUUGGU   CUCAUCAUUUUA  AA CC CG  GUUUGGA      CU  GAUUUUUUUG   GUGU G                            G   ||||||||||||  || || ||  |||||||      ||  ||||||||||   |||| |                            A   GAGUAGUAAAAU  UU GG GC  CAGAUUU      GG  CUAAAAAGAU   ACUU U                            U UU            AG  A  A  GG       -AUAAA  -U          GUA    U UUCCAAUAGUUUUAUAUAAGUUAGUUAU |
Stem-loop sequence | CUCAUCAUUUUAAAAACCCGGUUUGGAAAAUUGCUUUGAUUUUUUUGGGUGUGAUGAUAUACUUGAACGGUAGAGGUUGGUGAUUAUUGAUUGAAUAUAUUUUGAUAACCUUUUUUCAAUGUAGAAAAAUCUGGAAAUAUUUAGACGGCGAGGAUUGAUAAAAUGAUGAGUU |