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BaseInfo

ncRNA ID novel_lus_miR678
Species Linum usitatissimum
Class miRNA
Genome position scaffold680:97558-97729 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR906804
Length 23
Mature sequence(if miRNA) 150 - GAGGAUUGAUAAAAUGAUGAGUU - 172
Stem-loop(if miRNA) --            AA  -  -  --       AAAUUG  UU          --G    - AUGAUAUACUUGAACGGUAGAGGUUGGU
  CUCAUCAUUUUA  AA CC CG  GUUUGGA      CU  GAUUUUUUUG   GUGU G                            G
  ||||||||||||  || || ||  |||||||      ||  ||||||||||   |||| |                            A
  GAGUAGUAAAAU  UU GG GC  CAGAUUU      GG  CUAAAAAGAU   ACUU U                            U
UU            AG  A  A  GG       -AUAAA  -U          GUA    U UUCCAAUAGUUUUAUAUAAGUUAGUUAU
Stem-loop sequence CUCAUCAUUUUAAAAACCCGGUUUGGAAAAUUGCUUUGAUUUUUUUGGGUGUGAUGAUAUACUUGAACGGUAGAGGUUGGUGAUUAUUGAUUGAAUAUAUUUUGAUAACCUUUUUUCAAUGUAGAAAAAUCUGGAAAUAUUUAGACGGCGAGGAUUGAUAAAAUGAUGAGUU