Search result

BaseInfo

ncRNA ID novel_lus_miR660
Species Linum usitatissimum
Class miRNA
Genome position scaffold260:213581-213804 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR906804
Length 22
Mature sequence(if miRNA) 203 - AUUCUUAGGAAAGGUUGAGUUG - 224
Stem-loop(if miRNA) --             G      UG    -    UA              -   A  AGU    AU     UU     AU      A           -        AGU    UU
  AUUCUUAGGAAAG UUGAGU  AGAU AGUG  AGAAAGGUUGAGUU GGG GU   GAGG  UUGUG  AGGAA  UUGGAU AAGGGAUAUAA GGAUUCCA   GGAA  A
  ||||||||||||| ||||||  |||| ||||  |||||||||||||| ||| ||   ||||  |||||  |||||  |||||| ||||||||||| ||||||||   ||||
  UAAGGAUCCUUUC AACUUA  UCUA UCAC  UUUUUUCGACUCAA CUC CA   CUUC  AACAC  UUCUU  AAUUUA UUCCCUAUAUU CCUAAGGU   CCUU  U
GU             -      GU    G    -C              A   -  AGU    CC     UC     AC      G           U        AAC    UG
Stem-loop sequence AUUCUUAGGAAAGGUUGAGUUGAGAUAGUGUAAGAAAGGUUGAGUUGGGAGUAGUGAGGAUUUGUGUUAGGAAAUUUGGAUAAAGGGAUAUAAGGAUUCCAAGUGGAAUUAUGUUUCCCAAUGGAAUCCUUUAUAUCCCUUGAUUUAACAUUCUUCUCACAACCCUUCUGAACCUCAAACUCAGCUUUUUUCCACUGAUCUUGAUUCAACUUUCCUAGGAAUUG