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BaseInfo

ncRNA ID novel_lus_miR642
Species Linum usitatissimum
Class miRNA
Genome position scaffold380:1015766-1015940 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR906803
Length 24
Mature sequence(if miRNA) 152 - AUUUUAGGGCGUCGUUUAAUUCGA - 175
Stem-loop(if miRNA) --          G  G       - G AA  -U     -  -GG     G   --U  GAU   UAAU  UAACAU     -ACG    U  AA
  AUUUUAGGGC UC UUUAAUU C A  AU  AGAGC GU   UUUAG GAU   CA   UCA    GA      AAUGG    UAGC AC  U
  |||||||||| || ||||||| | |  ||  ||||| ||   ||||| |||   ||   |||    ||      |||||    |||| ||  G
  UGAGAUCCCG AG AAAUUGA G U  UG  UCUCG CG   AAAUC CUG   GU   AGU    CU      UUACC    AUCG UG  C
UU          -  -       A G CC  UU     A  AGA     G   UUC  AAU   --UU  ---UCC     GGUA    U  CU
Stem-loop sequence AUUUUAGGGCGUCGUUUAAUUCGAAAAUUAGAGCGUGGUUUAGGGAUUCAGAUUCAUAAUGAUAACAUAAUGGACGUAGCUACAAUGCUCGUUGCUAAUGGCCAUUCCUUCUUUGAUAAUGCUUGUCGCUAAAAGAGCAGCUCUUUGUCCUGGAAGUUAAAGAGCCCUAGAGUUU