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BaseInfo

ncRNA ID ahy-miR394
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 20
Mature sequence(if miRNA) NA - UUGGCAUUCUGUCCACCUCC - NA
Stem-loop(if miRNA) AG    U    -  U    AU      AUU   U        -  UC  
  GCAU GUUC CA AGCC  UUUGGC   CUG CCACCUCC GA  CGA
  |||| |||| || ||||  ||||||   ||| |||||||| ||  ||U
  UGUA UAAG GU UUGG  AAACCG   GAC GGUGGAGG CU  GCC
--    -    U  C    GC      GAU   C        G  UA  
Stem-loop sequence AGGCAUUGUUCCAUAGCCAUUUUGGCAUUCUGUCCACCUCCGAUCCGAUCCGAUUCGGGAGGUGGCCAGUAGGCCAAACGGGUUCUGUGAAUAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KC355793.1
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:415   GGAGGUAGACAGAAUGCCAA   434

1.0 Arachis hypogaea clone Contig15234 F-box family protein 6 mRNA, partial cds NA coding protein psRNATarget
JR579735.1
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:1208   GGAGGUAGACAGAAUGCCAA   1227

1.0 TSA: Arachis hypogaea Ahy.Unigene45441 mRNA sequence NA coding protein psRNATarget
GAER01031180.1
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:1328   GGAGGUAGACAGAAUGCCAA   1347

1.0 TSA: Arachis hypogaea Unigene31201 mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).