ncRNA ID | ahy-miR394 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | NA - UUGGCAUUCUGUCCACCUCC - NA |
Stem-loop(if miRNA) |
AG    U    -  U    AU      AUU   U        -  UC     GCAU GUUC CA AGCC  UUUGGC   CUG CCACCUCC GA  CGA   |||| |||| || ||||  ||||||   ||| |||||||| ||  ||U   UGUA UAAG GU UUGG  AAACCG   GAC GGUGGAGG CU  GCC --    -    U  C    GC      GAU   C        G  UA   |
Stem-loop sequence | AGGCAUUGUUCCAUAGCCAUUUUGGCAUUCUGUCCACCUCCGAUCCGAUCCGAUUCGGGAGGUGGCCAGUAGGCCAAACGGGUUCUGUGAAUAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KC355793.1 |
|
1.0 | Arachis hypogaea clone Contig15234 F-box family protein 6 mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
JR579735.1 |
|
1.0 | TSA: Arachis hypogaea Ahy.Unigene45441 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01031180.1 |
|
1.0 | TSA: Arachis hypogaea Unigene31201 mRNA sequence | NA | coding protein | psRNATarget |
1 | PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010). |