ncRNA ID | novel_lus_miR580 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold86:491935-492076 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611441 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGAAAAAGAAUCGUAGGCUGAUU - 23 |
Stem-loop(if miRNA) |
--A          C                    C       UU        AUUU    ---        U    GAAAAAGAAU GUAGGCUGAUUAAAAUUAAA AAUCCAU  CUUAAAAA    GAAU   UUAUUUCU U    |||||||||| |||||||||||||||||||| |||||||  ||||||||    ||||   |||||||| U    UUUUUUCUUA CAUCCGGCUAAUUUUAAUUU UUAGGUA  GGAUUUUU    UUUA   GGUAGAGG U CAC          A                    A       GG        CCUU    UAU        A |
Stem-loop sequence | AGAAAAAGAAUCGUAGGCUGAUUAAAAUUAAACAAUCCAUUUCUUAAAAAAUUUGAAUUUAUUUCUUUUUAGGAGAUGGUAUAUUUUUCCUUUUUAGGGGAUGGAUUAUUUAAUUUUAAUCGGCCUACAAUUCUUUUUUCAC |