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BaseInfo

ncRNA ID novel_lus_miR560
Species Linum usitatissimum
Class miRNA
Genome position scaffold5513:260-465 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611440
Length 24
Mature sequence(if miRNA) 183 - AUGAAACUUGACUCUUUAGCCAUU - 206
Stem-loop(if miRNA) --A        -    C    G          CAC                  GAUUG      U     A       G       GCC  AU    A    UUA
   UGAAACUU GACU UUUA CCAUUUCCAA   ACAUGUCAAAUAUUAGCC     GAAAAU UUCAA UUUUUAU UCAAAAU   UC  UUUC UAGA   A
   |||||||| |||| |||| ||||||||||   ||||||||||||||||||     |||||| ||||| ||||||| |||||||   ||  |||| ||||
   ACUUUGGA UUGA AAAU GGUAAGGGUU   UGUGCAGUUUAUAAUCGG     UUUUUG AAGUU AAAAGUG AGUUUUA   AG  AAAG AUUU   C
AUC        G    -    A          UCA                  AAAAA      U     -       G       AAC  CU    -    CAC
Stem-loop sequence AUGAAACUUGACUCUUUAGCCAUUUCCAACACACAUGUCAAAUAUUAGCCGAUUGGAAAAUUUUCAAAUUUUUAUGUCAAAAUGCCUCAUUUUCAUAGAUUAACCACUUUAGAAAUCGACAAAUUUUGAGGUGAAAAUUGAAUGUUUUUAAAAAGGCUAAUAUUUGACGUGUACUUUGGGAAUGGAUAAAAGUUGAGGUUUCACUA