ncRNA ID | novel_lus_miR560 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold5513:260-465 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611440 |
Length | 24 |
Mature sequence(if miRNA) | 183 - AUGAAACUUGACUCUUUAGCCAUU - 206 |
Stem-loop(if miRNA) |
--A        -    C    G          CAC                  GAUUG      U     A       G       GCC  AU    A    UUA    UGAAACUU GACU UUUA CCAUUUCCAA   ACAUGUCAAAUAUUAGCC     GAAAAU UUCAA UUUUUAU UCAAAAU   UC  UUUC UAGA   A    |||||||| |||| |||| ||||||||||   ||||||||||||||||||     |||||| ||||| ||||||| |||||||   ||  |||| ||||    ACUUUGGA UUGA AAAU GGUAAGGGUU   UGUGCAGUUUAUAAUCGG     UUUUUG AAGUU AAAAGUG AGUUUUA   AG  AAAG AUUU   C AUC        G    -    A          UCA                  AAAAA      U     -       G       AAC  CU    -    CAC |
Stem-loop sequence | AUGAAACUUGACUCUUUAGCCAUUUCCAACACACAUGUCAAAUAUUAGCCGAUUGGAAAAUUUUCAAAUUUUUAUGUCAAAAUGCCUCAUUUUCAUAGAUUAACCACUUUAGAAAUCGACAAAUUUUGAGGUGAAAAUUGAAUGUUUUUAAAAAGGCUAAUAUUUGACGUGUACUUUGGGAAUGGAUAAAAGUUGAGGUUUCACUA |