ncRNA ID | novel_lus_miR550 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold203:104323-104555 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611439;ERR1611443;ERR906802 |
Length | 22 |
Mature sequence(if miRNA) | 212 - UCUUUCCGAUGCCUUCCAUUCC - 233 |
Stem-loop(if miRNA) |
--     C    -           ACAAAC                ---GU AUCUGUAUUCCUUUUCUUUUUGAUGCCUUUCAUUUCAAUAAUUUCCAUCUAUCAAUAAGCCUACUAU   AAUGG GGGU UCGGAAAGAGA      GAAUCAGUAUUGAUUC     C                                                                   A   ||||| |||| |||||||||||      ||||||||||||||||     |   UUACC UCCG AGCCUUUCUUU      CUUAGUUGUGAUUAAG     A                                                                   U CC     U    U           -GCUUA                AAAAU AAAGAAAGGCUUGGGUGGUAAGGUAACUGAGGGUGUGUGUGGAACUAGAGUACCGGAAAAAGCUGAU |
Stem-loop sequence | AAUGGCGGGUUCGGAAAGAGAACAAACGAAUCAGUAUUGAUUCGUCAUCUGUAUUCCUUUUCUUUUUGAUGCCUUUCAUUUCAAUAAUUUCCAUCUAUCAAUAAGCCUACUAUAUUAGUCGAAAAAGGCCAUGAGAUCAAGGUGUGUGUGGGAGUCAAUGGAAUGGUGGGUUCGGAAAGAAAAUAAAAGAAUUAGUGUUGAUUCAUUCGUUUCUUUCCGAUGCCUUCCAUUCC |