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BaseInfo

ncRNA ID novel_lus_miR550
Species Linum usitatissimum
Class miRNA
Genome position scaffold203:104323-104555 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611439;ERR1611443;ERR906802
Length 22
Mature sequence(if miRNA) 212 - UCUUUCCGAUGCCUUCCAUUCC - 233
Stem-loop(if miRNA) --     C    -           ACAAAC                ---GU AUCUGUAUUCCUUUUCUUUUUGAUGCCUUUCAUUUCAAUAAUUUCCAUCUAUCAAUAAGCCUACUAU
  AAUGG GGGU UCGGAAAGAGA      GAAUCAGUAUUGAUUC     C                                                                   A
  ||||| |||| |||||||||||      ||||||||||||||||     |
  UUACC UCCG AGCCUUUCUUU      CUUAGUUGUGAUUAAG     A                                                                   U
CC     U    U           -GCUUA                AAAAU AAAGAAAGGCUUGGGUGGUAAGGUAACUGAGGGUGUGUGUGGAACUAGAGUACCGGAAAAAGCUGAU
Stem-loop sequence AAUGGCGGGUUCGGAAAGAGAACAAACGAAUCAGUAUUGAUUCGUCAUCUGUAUUCCUUUUCUUUUUGAUGCCUUUCAUUUCAAUAAUUUCCAUCUAUCAAUAAGCCUACUAUAUUAGUCGAAAAAGGCCAUGAGAUCAAGGUGUGUGUGGGAGUCAAUGGAAUGGUGGGUUCGGAAAGAAAAUAAAAGAAUUAGUGUUGAUUCAUUCGUUUCUUUCCGAUGCCUUCCAUUCC