Search result

BaseInfo

ncRNA ID novel_lus_miR544
Species Linum usitatissimum
Class miRNA
Genome position scaffold61:75755-75975 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611439
Length 22
Mature sequence(if miRNA) 200 - UUCUUUCCGAUGCCUUCCAUUC - 221
Stem-loop(if miRNA) --    U    -            UA  A   ---U  G      A  C         C   U    U       AG   U          CAAUAA    --AUUG   U    GA
  AUGG GGGC UCGGAAAGAAAA  AA GAA    CA UGAUUU UU GUUUUCUUU CGA GCCU CCAUUCC  UGA UUCCAUCCAU      GCCU      CAU AGUC  G
  |||| |||| ||||||||||||  || |||    || |||||| || ||||||||| ||| |||| |||||||  ||| ||||||||||      ||||      ||| ||||  A
  UACC UCCG AGCCUUUCUUUU  UU CUU    GU ACUAAG AA CAAAAGAAA GUU CGGG GGUAAGG  GCU AGGGUGGGUA      CGGA      GUA UCGG  A
CU    U    U            GC  A   UGUU  G      A  A         C   -    U       CG   U          ------    GCUAGA   -    GA
Stem-loop sequence AUGGUGGGCUCGGAAAGAAAAUAAAAGAAUCAGUGAUUUAUUCGUUUUCUUUCCGAUGCCUUCCAUUCCAGUGAUUUCCAUCCAUCAAUAAGCCUAUUGCAUUAGUCGAGAAAGGGCUAUGAGAUCGAGGCAUGGGUGGGAUUCGGCGGAAUGGUGGGCUUGCAAAGAAAACAAAAGAAUCAGUGUUGUUUCAUUCGUUUUCUUUCCGAUGCCUUCCAUUC