ncRNA ID | novel_lus_miR544 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold61:75755-75975 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611439 |
Length | 22 |
Mature sequence(if miRNA) | 200 - UUCUUUCCGAUGCCUUCCAUUC - 221 |
Stem-loop(if miRNA) |
--    U    -            UA  A   ---U  G      A  C         C   U    U       AG   U          CAAUAA    --AUUG   U    GA   AUGG GGGC UCGGAAAGAAAA  AA GAA    CA UGAUUU UU GUUUUCUUU CGA GCCU CCAUUCC  UGA UUCCAUCCAU      GCCU      CAU AGUC  G   |||| |||| ||||||||||||  || |||    || |||||| || ||||||||| ||| |||| |||||||  ||| ||||||||||      ||||      ||| ||||  A   UACC UCCG AGCCUUUCUUUU  UU CUU    GU ACUAAG AA CAAAAGAAA GUU CGGG GGUAAGG  GCU AGGGUGGGUA      CGGA      GUA UCGG  A CU    U    U            GC  A   UGUU  G      A  A         C   -    U       CG   U          ------    GCUAGA   -    GA |
Stem-loop sequence | AUGGUGGGCUCGGAAAGAAAAUAAAAGAAUCAGUGAUUUAUUCGUUUUCUUUCCGAUGCCUUCCAUUCCAGUGAUUUCCAUCCAUCAAUAAGCCUAUUGCAUUAGUCGAGAAAGGGCUAUGAGAUCGAGGCAUGGGUGGGAUUCGGCGGAAUGGUGGGCUUGCAAAGAAAACAAAAGAAUCAGUGUUGUUUCAUUCGUUUUCUUUCCGAUGCCUUCCAUUC |