ncRNA ID | novel_lus_miR540 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold461:3115-3222 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611439 |
Length | 24 |
Mature sequence(if miRNA) | 85 - AAAUUAGAAGUUUUUAAAUGGGCU - 108 |
Stem-loop(if miRNA) |
--  G            G A         G     A     C       U   U   UC AUUUGAAAAUUU C AAUUUUCAU UUAAA UUGUU AUUUCCA AGG G   || |||||||||||| | ||||||||| ||||| ||||| ||||||| ||| U   GG UAAAUUUUUGAA G UUAAAAGUG AGUUU AACAG UAAAGGU UCC U UC  G            - A         G     A     U       U   C |
Stem-loop sequence | UCGAUUUGAAAAUUUGCAAAUUUUCAUGUUAAAAUUGUUCAUUUCCAUAGGUGUUCCCUUUGGAAAUUGACAAAUUUGAGGUGAAAAUUAGAAGUUUUUAAAUGGGCU |