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BaseInfo

ncRNA ID novel_lus_miR540
Species Linum usitatissimum
Class miRNA
Genome position scaffold461:3115-3222 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611439
Length 24
Mature sequence(if miRNA) 85 - AAAUUAGAAGUUUUUAAAUGGGCU - 108
Stem-loop(if miRNA) --  G            G A         G     A     C       U   U
  UC AUUUGAAAAUUU C AAUUUUCAU UUAAA UUGUU AUUUCCA AGG G
  || |||||||||||| | ||||||||| ||||| ||||| ||||||| ||| U
  GG UAAAUUUUUGAA G UUAAAAGUG AGUUU AACAG UAAAGGU UCC U
UC  G            - A         G     A     U       U   C
Stem-loop sequence UCGAUUUGAAAAUUUGCAAAUUUUCAUGUUAAAAUUGUUCAUUUCCAUAGGUGUUCCCUUUGGAAAUUGACAAAUUUGAGGUGAAAAUUAGAAGUUUUUAAAUGGGCU