ncRNA ID | novel_lus_miR539 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold35:594473-594620 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611439 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CCCGCCUUGCAUCAACUGAAU - 21 |
Stem-loop(if miRNA) |
--   C          U     A      -   UAUCG    CUA   UU C    -      UUCUU    U   CCUU   UCG UUGGUGCAGG CGGGA CUAAUU GCU     UCCC   GAU  G CGAC GCCAUC     UCUC GGC    C   ||| |||||||||| ||||| |||||| |||     ||||   |||  | |||| ||||||     |||| |||    U   AGU AACUACGUUC GCCCU GAUUAA UGA     AGGG   CUG  C GCUG CGGUGG     AGAG UCG    C UA   C          C     A      G   -----    -CA   -- U    U      --CAU    -   CCCU |
Stem-loop sequence | UCGCUUGGUGCAGGUCGGGAACUAAUUGCUUAUCGUCCCCUAGAUUUGCCGACGCCAUCUUCUUUCUCUGGCCCUUCUCUCCCGCUGAGAUACGGUGGCUGUCGUCGUCACGGGAAGUGAAUUAGAUCCCGCCUUGCAUCAACUGAAU |