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BaseInfo

ncRNA ID novel_lus_miR538
Species Linum usitatissimum
Class miRNA
Genome position scaffold34:965111-965256 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611439;ERR906804
Length 24
Mature sequence(if miRNA) 1 - AUACAUGUCAAAUAUUAGUCGAUU - 24
Stem-loop(if miRNA) --AUA              GU          A    GA      CU A G     -            UA  UG
     CAUGUCAAAUAUUA  CGAUUUGAAA UUUU  AAUUUU  U U AAAAU GGUCAAUUUUCA  GG  U
     ||||||||||||||  |||||||||| ||||  ||||||  | | ||||| ||||||||||||  ||
     GUACAGUUUAUAAU  GUUAAACUUU AAAA  UUAAAA  A A UUUUA CUAGUUAAAAGU  CC  U
UAUAC              AG          A    -A      AU C G     A            UC  CC
Stem-loop sequence AUACAUGUCAAAUAUUAGUCGAUUUGAAAAUUUUGAAAUUUUCUUAUGAAAAUGGUCAAUUUUCAUAGGUGUUCCCCCUUGAAAAUUGAUCAAUUUUGACAUAAAAAUUAAAAAAUUUCAAAUUGGAUAAUAUUUGACAUGCAUAU