Search result

BaseInfo

ncRNA ID novel_lus_miR530
Species Linum usitatissimum
Class miRNA
Genome position scaffold1230:38841-39017 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611438
Length 22
Mature sequence(if miRNA) 156 - UCUUUCCGAUGCCUUCCAUUUC - 177
Stem-loop(if miRNA) --         U  CUU         UG UUUA     CGAUAU       -UU      AG  GAAAAGUGUAGCCAAGUACAGAGUAGU
  UCUUUCCGA GC   CCAUUUCAU  A    CCUAU      AGCCUAG   UCAUUG  UU                           A
  ||||||||| ||   |||||||||  |    |||||      |||||||   ||||||  ||
  AGAAAGGCU CG   GGUAAAGUG  U    GGGUG      UUGGAUU   AGUAGC  CG                           A
AA         -  UGU         GU -UAG     --AGGU       GUU      CG  GGAGUUUUAUACAUGGAGUAGUAGAAG
Stem-loop sequence UCUUUCCGAUGCCUUCCAUUUCAUUGAUUUACCUAUCGAUAUAGCCUAGUUUCAUUGAGUUGAAAAGUGUAGCCAAGUACAGAGUAGUAAGAAGAUGAUGAGGUACAUAUUUUGAGGGCGCCGAUGAUUGUUAGGUUUGGAGUGGGGAUUUGGUGAAAUGGUGUGCUCGGAAAGAAA