ncRNA ID | novel_lus_miR498 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold217:915373-915537 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611437 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUCUAGUUGUGAAAAGAAAGAAC - 24 |
Stem-loop(if miRNA) |
--                 A     -----C        GG              A          G   AGG    UGG    UG   AGUCUAGUUGUGAAAAG AAGAA      AAAUUAAG  UUAGUUUGGGGUUU AAAAAUAAUU UGU   GGAG   UAUU  A   ||||||||||||||||| |||||      ||||||||  |||||||||||||| |||||||||| |||   ||||   ||||   UCAGAUCAACACUUUUC UUCUU      UUUAAUUC  AAUCAAACCCCAAA UUUUUAUUAA ACA   CUUU   GUGA  A AA                 C     AUUUUU        -A              A          A   AUA    -GA    UU |
Stem-loop sequence | AGUCUAGUUGUGAAAAGAAAGAACAAAUUAAGGGUUAGUUUGGGGUUUAAAAAAUAAUUGUGUAGGGGAGUGGUAUUUGAAUUAGUGAGUUUCAUAACAAAAUUAUUUUUAAAACCCCAAACUAAACUUAAUUUUUUUUAUUCUUCCUUUUCACAACUAGACUAA |