Search result

BaseInfo

ncRNA ID novel_lus_miR498
Species Linum usitatissimum
Class miRNA
Genome position scaffold217:915373-915537 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611437
Length 24
Mature sequence(if miRNA) 1 - AGUCUAGUUGUGAAAAGAAAGAAC - 24
Stem-loop(if miRNA) --                 A     -----C        GG              A          G   AGG    UGG    UG
  AGUCUAGUUGUGAAAAG AAGAA      AAAUUAAG  UUAGUUUGGGGUUU AAAAAUAAUU UGU   GGAG   UAUU  A
  ||||||||||||||||| |||||      ||||||||  |||||||||||||| |||||||||| |||   ||||   ||||
  UCAGAUCAACACUUUUC UUCUU      UUUAAUUC  AAUCAAACCCCAAA UUUUUAUUAA ACA   CUUU   GUGA  A
AA                 C     AUUUUU        -A              A          A   AUA    -GA    UU
Stem-loop sequence AGUCUAGUUGUGAAAAGAAAGAACAAAUUAAGGGUUAGUUUGGGGUUUAAAAAAUAAUUGUGUAGGGGAGUGGUAUUUGAAUUAGUGAGUUUCAUAACAAAAUUAUUUUUAAAACCCCAAACUAAACUUAAUUUUUUUUAUUCUUCCUUUUCACAACUAGACUAA