ncRNA ID | novel_lus_miR485 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold312:145031-145164 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611436 |
Length | 27 |
Mature sequence(if miRNA) | 1 - CUGCUGUAAGGGCCUGGCGCACCCCAC - 27 |
Stem-loop(if miRNA) |
--   -     A    -C     C     ACCAAUUUCC   UUA     UGUU      G UGUUCU    UUU   CUG CUGUA GGGC  UGGCG ACCCC          AGU   AAACU    CUGUAU C      UCAC   U   ||| ||||| ||||  ||||| |||||          |||   |||||    |||||| |      ||||   A   GAU GACAU CCUG  AUCGU UGGGG          UCA   UUUGG    GACGUA G      AGUG   A AU   U     -    UA     -     -------AUU   -UG     --UU      - --UUUU    UAA |
Stem-loop sequence | CUGCUGUAAGGGCCUGGCGCACCCCACCAAUUUCCAGUUUAAAACUUGUUCUGUAUGCUGUUCUUCACUUUUAAAAUGUGAUUUUGAUGCAGUUGGUUUGUACUUUAGGGGUUGCUAAUGUCCUACAGUUAGUA |