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BaseInfo

ncRNA ID novel_lus_miR485
Species Linum usitatissimum
Class miRNA
Genome position scaffold312:145031-145164 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611436
Length 27
Mature sequence(if miRNA) 1 - CUGCUGUAAGGGCCUGGCGCACCCCAC - 27
Stem-loop(if miRNA) --   -     A    -C     C     ACCAAUUUCC   UUA     UGUU      G UGUUCU    UUU
  CUG CUGUA GGGC  UGGCG ACCCC          AGU   AAACU    CUGUAU C      UCAC   U
  ||| ||||| ||||  ||||| |||||          |||   |||||    |||||| |      ||||   A
  GAU GACAU CCUG  AUCGU UGGGG          UCA   UUUGG    GACGUA G      AGUG   A
AU   U     -    UA     -     -------AUU   -UG     --UU      - --UUUU    UAA
Stem-loop sequence CUGCUGUAAGGGCCUGGCGCACCCCACCAAUUUCCAGUUUAAAACUUGUUCUGUAUGCUGUUCUUCACUUUUAAAAUGUGAUUUUGAUGCAGUUGGUUUGUACUUUAGGGGUUGCUAAUGUCCUACAGUUAGUA