ncRNA ID | novel_lus_miR471 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold98:78911-79139 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611435 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUUGGCUAAUAUUUGAUAUGUAU - 24 |
Stem-loop(if miRNA) |
--A                       GUC       A         U         -   U   G   UUC       AGCA     AA         ACU    AACAU     AAU    AUUGGCUAAUAUUUGAUAUGUAU   GGAAAUG CUAAAAAUU AGGUUUCAU GUG UAA CCC   AAAUAAU    AAAUG  GUUAAAAAU   UUUC     GCUAA   A    |||||||||||||||||||||||   ||||||| ||||||||| ||||||||| ||| ||| |||   |||||||    |||||  |||||||||   ||||     |||||    UAGCUGAUUAUAAACUGUACGUA   CUUUUAC GAUUUUUAG UUCAAAGUA UAC AUU GGG   UUUAUUA    UUUGC  UAAUUUUUA   AAAG     UGAUU   A AUA                       AAA       C         -         A   C   G   UUA       CUAG     CG         GUU    -----     CAC |
Stem-loop sequence | AAUUGGCUAAUAUUUGAUAUGUAUGUCGGAAAUGACUAAAAAUUUAGGUUUCAUGUGUUAAGCCCUUCAAAUAAUAGCAAAAUGAAGUUAAAAAUACUUUUCAACAUGCUAAAAUAACACUUAGUGAAAUUGAUUUUUAAUGCCGUUUGAUCAUUAUUUAUUGGGGUUACCAUAAUGAAACUUGAUUUUUAGCCAUUUUCAAAAUGCAUGUCAAAUAUUAGUCGAUAUA |