ncRNA ID | novel_lus_miR461 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1208:693-831 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 116 - CAAAAGGCUAAUAUUUGACGUGUA - 139 |
Stem-loop(if miRNA) |
--    G            GA               AA      AG      GCC  -       U  AUU   CAUG UAAAUAUUAGCC  UUGGAAAAUUUUCAA  UUUUAU  UAAAAU   UC AUUUUCA AG   A   |||| ||||||||||||  |||||||||||||||  ||||||  ||||||   || ||||||| ||   GUGC GUUUAUAAUCGG  AACUUUUUGAAAGUU  AAAGUG  AUUUUA   AG UAAAGGU UC   G AU    A            AA               -A      -G      AAC  C       U  ACC |
Stem-loop sequence | CAUGGUAAAUAUUAGCCGAUUGGAAAAUUUUCAAAAUUUUAUAGUAAAAUGCCUCAUUUUCAUAGAUUAGCCACUUUGGAAAUCGACAAAUUUUAGGUGAAAAUUGAAAGUUUUUCAAAAGGCUAAUAUUUGACGUGUA |