ncRNA ID | novel_lus_miR454 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold473:635669-635808 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCGACUAAUAUUUGACAUGCAUG - 24 |
Stem-loop(if miRNA) |
--UAA                AA      UU    --AAU    AU  C       A    -   C     G      AUGUCAAAUAUUAGUC  UUUGAA  UUUU     UUUC  GU AAAAUUG UCAA UUU CAUGU U      ||||||||||||||||  ||||||  ||||     ||||  || ||||||| |||| ||| |||||      UACAGUUUAUAAUCAG  AGACUU  AAAA     AAAG  CA UUUUAAC AGUU AAA GUAUA C GUACG                CG      UU    CUUUU    AC  C       -    U   A     A |
Stem-loop sequence | UAAAUGUCAAAUAUUAGUCAAUUUGAAUUUUUUAAUUUUCAUGUCAAAAUUGAUCAAUUUCCAUGUGUCAAUAUGAAAAUUUGACAAUUUUCACCAGAAAUUUUCAAAAUUUUCAGAGCGACUAAUAUUUGACAUGCAUG |