Search result

BaseInfo

ncRNA ID novel_lus_miR447
Species Linum usitatissimum
Class miRNA
Genome position scaffold4361:763-970 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 24
Mature sequence(if miRNA) 185 - UUGAUAUGCAUGUUGGAAAUGGCU - 208
Stem-loop(if miRNA) --    UA  C       A        AAA  U   -- A UUAAUCAUGGUAACCCCAGUAAAUAAUGGUCAAAUGGAUCUAAAAAUCAAUUUUACUCAAUAUUCU
  UUGA  UG AUGUUGG AAUGGCUA   AG UCC  A U                                                                  G
  ||||  || ||||||| ||||||||   || |||  | |
  AACU  AC UACAACC UUACCGAU   UU UAG  C C                                                                  U
UA    GC  A       C        --G  -   CU - AAAGUGGUACAAUUCAUGAGGUUUAUUAUCCGAUUACUUCAUUUUUUUAUAAAGAAUUGGGCGAUU
Stem-loop sequence UUGAUAUGCAUGUUGGAAAUGGCUAAAAAGUUCCAAUUUAAUCAUGGUAACCCCAGUAAAUAAUGGUCAAAUGGAUCUAAAAAUCAAUUUUACUCAAUAUUCUGUUUAGCGGGUUAAGAAAUAUUUUUUUACUUCAUUAGCCUAUUAUUUGGAGUACUUAACAUGGUGAAACCUCGAUUUGUAGCCAUUCCCAACAUACACGUCAAAU