ncRNA ID | novel_lus_miR443 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold391:113972-114124 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 21 |
Mature sequence(if miRNA) | 133 - UGGAGAAAUGGCCGGAGACCU - 153 |
Stem-loop(if miRNA) |
--       U                      A      CAU    C              A          CAACG   GUUUCCG CCAUUUCUCCGUUAUAUUGAAU AUGUGG   AUGC AAAUGGGCUUUCUU UACACAUGGA     U   ||||||| |||||||||||||||||||||| ||||||   |||| |||||||||||||| ||||||||||     U   CAGAGGC GGUAAAGAGGUAAUAUAACUUA UGCACU   UGCG UUUAUCCGAAAGAA GUGUGUAUCU     C UC       C                      C      --U    A              C          AUCCA |
Stem-loop sequence | GUUUCCGUCCAUUUCUCCGUUAUAUUGAAUAAUGUGGCAUAUGCCAAAUGGGCUUUCUUAUACACAUGGACAACGUUCACCUAUCUAUGUGUGCAAGAAAGCCUAUUUAGCGUUUCACGUCAUUCAAUAUAAUGGAGAAAUGGCCGGAGACCU |