ncRNA ID | novel_lus_miR431 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold3168:355-562 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUGACGUGAAUGUUAGGAACGGC - 24 |
Stem-loop(if miRNA) |
--         A     A    ----C    AA   -- - GA  UUCGCCAAGUUAAGCCCUUCUAAAAAUAGCGAAAUGAUGUUAAAAAAAUAAUUCUUAACGCGCA   UUUGACGUG AUGUU GGAA     GGCU  UAA  U U  GG                                                                A   ||||||||| ||||| ||||     ||||  |||  | |  ||                                                                A   AAACUGCAC UACAA CGUU     UAUU  UCA  U A  AA                                                                A AC         G     A    ACCGA    --   GU C --  GUAAUAUCAUUGGGGCUUUUUCUUACCCGUUUACUUAAAUUUUUAGUUGAAAUGAUCUUUAAUA |
Stem-loop sequence | UUUGACGUGAAUGUUAGGAACGGCUAAUAAUUGAGGUUCGCCAAGUUAAGCCCUUCUAAAAAUAGCGAAAUGAUGUUAAAAAAAUAAUUCUUAACGCGCAAAAAUAAUUUCUAGUAAAGUUGAUUUUUAAAUUCAUUUGCCCAUUCUUUUUCGGGGUUACUAUAAUGAAACUUGACUUUAUAGCCAUUGCAAACAUGCACGUCAAACA |