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BaseInfo

ncRNA ID novel_lus_miR417
Species Linum usitatissimum
Class miRNA
Genome position scaffold2703:407-579 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372;SRR2996372
Length 24
Mature sequence(if miRNA) 150 - GACAUGCAUGUUGGAAAUGGCUAU - 173
Stem-loop(if miRNA) --       C       A  C  A  A     AU  C    A          -     CAC C      UU  GG       A   GU
  AGCCAUU CCAACAU CA GU CA AUAUU  CC AUUU AGAGUUUUUA AUUUU   C CAAAAU  GU  AUUUCCA AGG  A
  ||||||| ||||||| || || || |||||  || |||| |||||||||| |||||   | ||||||  ||  ||||||| |||
  UCGGUAA GGUUGUA GU CA GU UAUAA  GG UAAA UUUUAAAAGU UAAAA   G GUUUUA  CA  UAAAGGU UCC  A
UA       A       C  A  -  A     GC  U    C          A     AUA A      -C  AG       A   AC
Stem-loop sequence AGCCAUUCCCAACAUACACGUACAAAUAUUAUCCCAUUUAAGAGUUUUUAAUUUUCACCCCAAAAUUUGUGGAUUUCCAAAGGGUAACACCUAUGGAAAUGAACCAUUUUGAGAUAAAAAUAUGAAAAUUUUCAAAUUGGCGAAUAUAUGACAUGCAUGUUGGAAAUGGCUAU