ncRNA ID | novel_lus_miR417 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold2703:407-579 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372;SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 150 - GACAUGCAUGUUGGAAAUGGCUAU - 173 |
Stem-loop(if miRNA) |
--       C       A  C  A  A     AU  C    A          -     CAC C      UU  GG       A   GU   AGCCAUU CCAACAU CA GU CA AUAUU  CC AUUU AGAGUUUUUA AUUUU   C CAAAAU  GU  AUUUCCA AGG  A   ||||||| ||||||| || || || |||||  || |||| |||||||||| |||||   | ||||||  ||  ||||||| |||   UCGGUAA GGUUGUA GU CA GU UAUAA  GG UAAA UUUUAAAAGU UAAAA   G GUUUUA  CA  UAAAGGU UCC  A UA       A       C  A  -  A     GC  U    C          A     AUA A      -C  AG       A   AC |
Stem-loop sequence | AGCCAUUCCCAACAUACACGUACAAAUAUUAUCCCAUUUAAGAGUUUUUAAUUUUCACCCCAAAAUUUGUGGAUUUCCAAAGGGUAACACCUAUGGAAAUGAACCAUUUUGAGAUAAAAAUAUGAAAAUUUUCAAAUUGGCGAAUAUAUGACAUGCAUGUUGGAAAUGGCUAU |