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BaseInfo

ncRNA ID novel_lus_miR413
Species Linum usitatissimum
Class miRNA
Genome position scaffold2581:13615-13779 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 24
Mature sequence(if miRNA) 1 - GACAUGUAUGUUGGAAAUGGCUAA - 24
Stem-loop(if miRNA) --AA                  A            -------     AG             C    UU   CA       A   GG
    CCAUUUUCAAUAUGCGUG CAAAUAUUAGUC       AAAUU  AAAAUUUUCAUGU AAAA  GGU  AUUUCUA AGG  U
    |||||||||||||||||| ||||||||||||       |||||  ||||||||||||| ||||  |||  ||||||| |||
    GGUAAAGGUUGUAUGUAC GUUUAUAAUCGG       UUUAA  UUUUAAAAGUAUA UUUU  CCA  UAAAGGU UCU  U
AAUC                  A            CUAAAAU     AA             -    -U   AG       A   AA
Stem-loop sequence AACCAUUUUCAAUAUGCGUGACAAAUAUUAGUCAAAUUAGAAAAUUUUCAUGUCAAAAUUGGUCAAUUUCUAAAGGGGUUAAUCUAUGGAAAUGAACCUUUUUAUAUGAAAAUUUUAAAAUUUUAAAAUCGGCUAAUAUUUGACAUGUAUGUUGGAAAUGGCUAA