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BaseInfo

ncRNA ID novel_lus_miR410
Species Linum usitatissimum
Class miRNA
Genome position scaffold257:6407-6563 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 23
Mature sequence(if miRNA) 135 - UUUACAUGCAUGUUGGGAAUGGC - 157
Stem-loop(if miRNA) --A                 C  C       CG       --------                -  C   --      -U   U
   GUUUCCAACAUGCAUGU AA UAUUAGC  AUUUGAA        AUUUUCAUGUCAAAAU GG UCA  UUUCGA  AGG U
   ||||||||||||||||| || |||||||  |||||||        |||||||||||||||| || |||  ||||||  |||
   UAAGGGUUGUACGUACA UU AUAAUUG  UAAACUU        UAAAAGUACAGUUUUA CC AGU  GAGGUU  UCC A
CGG                 U  U       AU       GAUAAAAU                A  -   UA      UC   A
Stem-loop sequence AGUUUCCAACAUGCAUGUCAACUAUUAGCCGAUUUGAAAUUUUCAUGUCAAAAUGGCUCAUUUCGAUAGGUUAACCUCUUUGGAGAUUGACCAAUUUUGACAUGAAAAUUAAAAUAGUUCAAAUUAGUUAAUAUUUUACAUGCAUGUUGGGAAUGGC