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BaseInfo

ncRNA ID novel_lus_miR408
Species Linum usitatissimum
Class miRNA
Genome position scaffold254:91296-91466 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 24
Mature sequence(if miRNA) 148 - GACAUGCAUGUUGGGAGUGGCUAA - 171
Stem-loop(if miRNA) --         A    C    U       A         UA        GA      CUU  -G     G           U   UU
  AGCCAUUUC AACA GCAU UUAAAUA UAGUCGAUU  GAAUUUUU  AAUUUU   GU  GAAAU GUCGAUUUCCA AGG  A
  ||||||||| |||| |||| ||||||| |||||||||  ||||||||  ||||||   ||  ||||| ||||||||||| |||
  UCGGUGAGG UUGU CGUA AGUUUAU AUCGGUUAA  UUUAAAAA  UUAAGA   CG  UUUUA CAGUUAAAGGU UCC  A
AA         G    A    C       A         GC        -A      -UU  AG     A           U   CC
Stem-loop sequence AGCCAUUUCAAACACGCAUUUUAAAUAAUAGUCGAUUUAGAAUUUUUGAAAUUUUCUUGUGGAAAUGGUCGAUUUCCAUAGGUUAACCCCUUUGGAAAUUGACAAUUUUGAGCUUAGAAUUAAAAAAUUUCGAAUUGGCUAAUAUUUGACAUGCAUGUUGGGAGUGGCUAA