ncRNA ID | novel_lus_miR408 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold254:91296-91466 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 148 - GACAUGCAUGUUGGGAGUGGCUAA - 171 |
Stem-loop(if miRNA) |
--         A    C    U       A         UA        GA      CUU  -G     G           U   UU   AGCCAUUUC AACA GCAU UUAAAUA UAGUCGAUU  GAAUUUUU  AAUUUU   GU  GAAAU GUCGAUUUCCA AGG  A   ||||||||| |||| |||| ||||||| |||||||||  ||||||||  ||||||   ||  ||||| ||||||||||| |||   UCGGUGAGG UUGU CGUA AGUUUAU AUCGGUUAA  UUUAAAAA  UUAAGA   CG  UUUUA CAGUUAAAGGU UCC  A AA         G    A    C       A         GC        -A      -UU  AG     A           U   CC |
Stem-loop sequence | AGCCAUUUCAAACACGCAUUUUAAAUAAUAGUCGAUUUAGAAUUUUUGAAAUUUUCUUGUGGAAAUGGUCGAUUUCCAUAGGUUAACCCCUUUGGAAAUUGACAAUUUUGAGCUUAGAAUUAAAAAAUUUCGAAUUGGCUAAUAUUUGACAUGCAUGUUGGGAGUGGCUAA |