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BaseInfo

ncRNA ID novel_lus_miR394
Species Linum usitatissimum
Class miRNA
Genome position scaffold462:240280-240482 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611435
Length 24
Mature sequence(if miRNA) 180 - AUGGCUAAAGUGUGAUGUUUCAUC - 203
Stem-loop(if miRNA) --C     C   AU           C C      CAA   AG    C   CCAUUUAAAAAAC    ---  UUUUCGAC    -  UUUGUUGGUUUCGAAAGCAACACCU
   GAAAC UCA  UUUUAGUCAUU C AACAUG   GUC  AUAU AGC             UUCA   AU        UCGA AA                         A
   ||||| |||  ||||||||||| | ||||||   |||  |||| |||             ||||   ||        |||| ||
   CUUUG AGU  GAAAUCGGUAA G UUGUAC   UAG  UAUA UCG             ACUU   AA        AACU UA                         U
CUA     U   GU           A A      UUA   CU    A   ---------AAAA    AAA  --------    U  AAAGUACAGUUUUACCAAGUAAAGU
Stem-loop sequence CGAAACCUCAAUUUUUAGUCAUUCCCAACAUGCAAGUCAGAUAUCAGCCCAUUUAAAAAACUUCAAUUUUUCGACUCGAAAUUUGUUGGUUUCGAAAGCAACACCUAUUGAAAUGAACCAUUUUGACAUGAAAAUUUCAAAAAAAUUCAAAAAGCUAAUAUUCGAUAUUCAUGUUAGAAAUGGCUAAAGUGUGAUGUUUCAUC