ncRNA ID | novel_lus_miR394 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold462:240280-240482 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611435 |
Length | 24 |
Mature sequence(if miRNA) | 180 - AUGGCUAAAGUGUGAUGUUUCAUC - 203 |
Stem-loop(if miRNA) |
--C     C   AU           C C      CAA   AG    C   CCAUUUAAAAAAC    ---  UUUUCGAC    -  UUUGUUGGUUUCGAAAGCAACACCU    GAAAC UCA  UUUUAGUCAUU C AACAUG   GUC  AUAU AGC             UUCA   AU        UCGA AA                         A    ||||| |||  ||||||||||| | ||||||   |||  |||| |||             ||||   ||        |||| ||    CUUUG AGU  GAAAUCGGUAA G UUGUAC   UAG  UAUA UCG             ACUU   AA        AACU UA                         U CUA     U   GU           A A      UUA   CU    A   ---------AAAA    AAA  --------    U  AAAGUACAGUUUUACCAAGUAAAGU |
Stem-loop sequence | CGAAACCUCAAUUUUUAGUCAUUCCCAACAUGCAAGUCAGAUAUCAGCCCAUUUAAAAAACUUCAAUUUUUCGACUCGAAAUUUGUUGGUUUCGAAAGCAACACCUAUUGAAAUGAACCAUUUUGACAUGAAAAUUUCAAAAAAAUUCAAAAAGCUAAUAUUCGAUAUUCAUGUUAGAAAUGGCUAAAGUGUGAUGUUUCAUC |