ncRNA ID | novel_lus_miR390 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1044:3085-3291 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUGACAUGCAUGUUGGGAAUGAU - 24 |
Stem-loop(if miRNA) |
--      A G             AU    U   AAGGAUG   C            UC     AUAGC      A        --CU       GAC   CUA   UUUGAC U CAUGUUGGGAAUG  UAAA AGU       CAC AUGUUAACCCCU  GAGUA     CAAAUG AGUUAAAA    AUUUUUC   AUG   A   |||||| | |||||||||||||  |||| |||       ||| ||||||||||||  |||||     |||||| ||||||||    |||||||   |||   A   AAACUG A GUACAACCUUUAC  AUUU UCG       GUG UACGAUUGGGGA  UUUAU     GUUUGU UCAAUUUU    UAAAAAG   UAC   A AU      A G             CG    U   GAACAAA   A            UA     CACUA      A        UAGU       AGA   AAC |
Stem-loop sequence | UUUGACAUGCAUGUUGGGAAUGAUUAAAUAGUAAGGAUGCACCAUGUUAACCCCUUCGAGUAAUAGCCAAAUGAAGUUAAAACUAUUUUUCGACAUGCUAAAACAACAUAGAGAAAAAUUGAUUUUUAACUAUGUUUGAUCACUAUUUAUAGGGGUUAGCAUAGUGAAACAAGGCUUUUUAGCCAUUUCCAACAUGGAAGUCAAAUA |