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BaseInfo

ncRNA ID novel_lus_miR390
Species Linum usitatissimum
Class miRNA
Genome position scaffold1044:3085-3291 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 24
Mature sequence(if miRNA) 1 - UUUGACAUGCAUGUUGGGAAUGAU - 24
Stem-loop(if miRNA) --      A G             AU    U   AAGGAUG   C            UC     AUAGC      A        --CU       GAC   CUA
  UUUGAC U CAUGUUGGGAAUG  UAAA AGU       CAC AUGUUAACCCCU  GAGUA     CAAAUG AGUUAAAA    AUUUUUC   AUG   A
  |||||| | |||||||||||||  |||| |||       ||| ||||||||||||  |||||     |||||| ||||||||    |||||||   |||   A
  AAACUG A GUACAACCUUUAC  AUUU UCG       GUG UACGAUUGGGGA  UUUAU     GUUUGU UCAAUUUU    UAAAAAG   UAC   A
AU      A G             CG    U   GAACAAA   A            UA     CACUA      A        UAGU       AGA   AAC
Stem-loop sequence UUUGACAUGCAUGUUGGGAAUGAUUAAAUAGUAAGGAUGCACCAUGUUAACCCCUUCGAGUAAUAGCCAAAUGAAGUUAAAACUAUUUUUCGACAUGCUAAAACAACAUAGAGAAAAAUUGAUUUUUAACUAUGUUUGAUCACUAUUUAUAGGGGUUAGCAUAGUGAAACAAGGCUUUUUAGCCAUUUCCAACAUGGAAGUCAAAUA