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BaseInfo

ncRNA ID novel_lus_miR375
Species Linum usitatissimum
Class miRNA
Genome position scaffold1249:129871-130095 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 24
Mature sequence(if miRNA) 202 - AUCGGCUAAUAGUUGACAUGCAUG - 225
Stem-loop(if miRNA) --AUCG      A     C           AAAUUA      A  -AA           GC  CU   C         AU    C UAA      G  AA     - UC G  UU
      GCUAAU GUUGA AUGCAUGUUUG      CUAAAA UU   GUUUUAUUAUG  AA  CCU UAAAUAAUG  CAAA G   UUAAAA GC  UUUUA C  G UG  A
      |||||| ||||| |||||||||||      |||||| ||   |||||||||||  ||  ||| |||||||||  |||| |   |||||| ||  ||||| |  | ||
      CGAUUA CAACU UACGUACAAAC      GAUUUU AA   CAAAGUGGUAC  UU  GGA GUUUAUUAU  GUUU C   AAUUUU UG  AAAAU G  C AU  U
UUUAAG      G     A           -CUUCC      C  CUC           AA  UG   A         CG    A UUC      G  --     U GA G  UU
Stem-loop sequence AUCGGCUAAUAGUUGACAUGCAUGUUUGAAAUUACUAAAAAUUAAGUUUUAUUAUGGCAACUCCUCUAAAUAAUGAUCAAACGUAAUUAAAAGGCAAUUUUACUCGGUGUUAUUUUAGCAGGUUAAAAGUGUUUUAACUUCAUUUGGCUAUUAUUUGAAGGGUUUAACAUGGUGAAACCUCAACUUUUAGCCUUCCAAACAUGCAUAUCAACGAUUAGCGAAUUU