ncRNA ID | novel_lus_miR375 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1249:129871-130095 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 202 - AUCGGCUAAUAGUUGACAUGCAUG - 225 |
Stem-loop(if miRNA) |
--AUCG      A     C           AAAUUA      A  -AA           GC  CU   C         AU    C UAA      G  AA     - UC G  UU       GCUAAU GUUGA AUGCAUGUUUG      CUAAAA UU   GUUUUAUUAUG  AA  CCU UAAAUAAUG  CAAA G   UUAAAA GC  UUUUA C  G UG  A       |||||| ||||| |||||||||||      |||||| ||   |||||||||||  ||  ||| |||||||||  |||| |   |||||| ||  ||||| |  | ||       CGAUUA CAACU UACGUACAAAC      GAUUUU AA   CAAAGUGGUAC  UU  GGA GUUUAUUAU  GUUU C   AAUUUU UG  AAAAU G  C AU  U UUUAAG      G     A           -CUUCC      C  CUC           AA  UG   A         CG    A UUC      G  --     U GA G  UU |
Stem-loop sequence | AUCGGCUAAUAGUUGACAUGCAUGUUUGAAAUUACUAAAAAUUAAGUUUUAUUAUGGCAACUCCUCUAAAUAAUGAUCAAACGUAAUUAAAAGGCAAUUUUACUCGGUGUUAUUUUAGCAGGUUAAAAGUGUUUUAACUUCAUUUGGCUAUUAUUUGAAGGGUUUAACAUGGUGAAACCUCAACUUUUAGCCUUCCAAACAUGCAUAUCAACGAUUAGCGAAUUU |