ncRNA ID | novel_lus_miR372 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold955:77757-77939 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 23 |
Mature sequence(if miRNA) | 161 - UAUGUUGGGAAUGGCUAAAAGUU - 183 |
Stem-loop(if miRNA) |
--      C              C  GAA  U            -         UG AAU         G     --GG  CA      UA  UU   UUUUUA CUAUUUCCAACAUG AU   AA UAUUAACUAAUU GGAAAAUUU  A   UUUUUAUCU AAAAU    CU  UUUCCA  GG  A   |||||| |||||||||||||| ||   || |||||||||||| |||||||||  |   ||||||||| |||||    ||  ||||||  ||   GAAAAU GGUAAGGGUUGUAU UG   UU AUAAUUGGUUAA UUUUUUAAA  U   AAAAGUGGA UUUUA    GA  AAAGGU  CC  A UU      C              U  AAG  U            A         GU ---         G     AACA  -A      UA  CC |
Stem-loop sequence | UUUUUACCUAUUUCCAACAUGCAUGAAAAUUAUUAACUAAUUGGAAAAUUUUGAAAUUUUUUAUCUGAAAAUGGCUCAUUUCCAUAGGUUAACCCCAUUGGAAAAAGACAAAUUUUGAGGUGAAAAUUGAAAUUUUUUAAAUUGGUUAAUAUUUGAAGUUUAUGUUGGGAAUGGCUAAAAGUU |