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BaseInfo

ncRNA ID novel_lus_miR372
Species Linum usitatissimum
Class miRNA
Genome position scaffold955:77757-77939 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 23
Mature sequence(if miRNA) 161 - UAUGUUGGGAAUGGCUAAAAGUU - 183
Stem-loop(if miRNA) --      C              C  GAA  U            -         UG AAU         G     --GG  CA      UA  UU
  UUUUUA CUAUUUCCAACAUG AU   AA UAUUAACUAAUU GGAAAAUUU  A   UUUUUAUCU AAAAU    CU  UUUCCA  GG  A
  |||||| |||||||||||||| ||   || |||||||||||| |||||||||  |   ||||||||| |||||    ||  ||||||  ||
  GAAAAU GGUAAGGGUUGUAU UG   UU AUAAUUGGUUAA UUUUUUAAA  U   AAAAGUGGA UUUUA    GA  AAAGGU  CC  A
UU      C              U  AAG  U            A         GU ---         G     AACA  -A      UA  CC
Stem-loop sequence UUUUUACCUAUUUCCAACAUGCAUGAAAAUUAUUAACUAAUUGGAAAAUUUUGAAAUUUUUUAUCUGAAAAUGGCUCAUUUCCAUAGGUUAACCCCAUUGGAAAAAGACAAAUUUUGAGGUGAAAAUUGAAAUUUUUUAAAUUGGUUAAUAUUUGAAGUUUAUGUUGGGAAUGGCUAAAAGUU