ncRNA ID | novel_lus_miR366 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold8:325532-325773 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUCAAAUCGGCUAAUAUUUCACA - 24 |
Stem-loop(if miRNA) |
--   C    C           C     C           UUA       C      -A     -UAU    CCUA    C      CA        U    CUCAA    A  CGG         UUU AAAU GGCUAAUAUUU ACAUG AUGUUGGAAAU   UAAAAAU AAGGAU  AUUAU    AACC    UAAA AAUGGU  AAUGAAGU AAAA     AUUU CU   GUGUUAU   ||| |||| ||||||||||| ||||| |||||||||||   ||||||| ||||||  |||||    ||||    |||| ||||||  |||||||| ||||     |||| ||   ||||||G   AAA UUUA CCGAUUAUAAA UGUAC UACAACUUUUA   AUUUUUA UUCCUA  UAGUA    UUGG    GUUU UUAUCG  UUAUUUCA UUUU     UAAA GG   UACGAUU AA   U    A           C     C           CCG       A      AC     UAAU    -CAA    A      UA        U    --UUA    A  UUA       |
Stem-loop sequence | UUUCAAAUCGGCUAAUAUUUCACAUGCAUGUUGGAAAUUUAUAAAAAUCAAGGAUAAUUAUUAUAACCCCUAUAAACAAUGGUCAAAUGAAGUUAAAACUCAAAUUUACUCGGGUGUUAUGUUAGCAUAUUGGAAAAUAUUUUUUUACUUUAUUAUGCUAUUAUUUGAACGGUUUAAUAUGAUCAAUCCUUAAUUUUUAGCCAUUUUCAACAUCCAUGUCAAAUAUUAGCCAAUUUUAAAAA |