ncRNA ID | novel_lus_miR365 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold825:45-226 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 159 - GCAUGUUGGGAAUGGCUAAAAAUA - 182 |
Stem-loop(if miRNA) |
--C     AU      A         AUA     -------------------------------C       UUUGAAAAUUUGAAAAUUUUCAUGUCAAAAUUG    UUUUA  CAUUCC AAUAUGUAU   AAAUA                                UAGCCAU                                 U    |||||  |||||| |||||||||   |||||                                |||||||                                 C    AAAAU  GUAAGG UUGUACGUA   UUUAU                                ACUUUUA                                 A AUA     CG      G         CAG     AAUCAGCUAAAUUUUAAAAAAAAAAAAAGAAA       CCAGUUAAAAGUAUCCAAUUGGUGAAACCUUUG |
Stem-loop sequence | CUUUUAAUCAUUCCAAAUAUGUAUAUAAAAUACUAGCCAUUUUGAAAAUUUGAAAAUUUUCAUGUCAAAAUUGUCAGUUUCCAAAGUGGUUAACCUAUGAAAAUUGACCAUUUUCAAAAGAAAAAAAAAAAAAUUUUAAAUCGACUAAUAUUUGACAUGCAUGUUGGGAAUGGCUAAAAAUA |