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BaseInfo

ncRNA ID novel_lus_miR355
Species Linum usitatissimum
Class miRNA
Genome position scaffold723:52035-52202 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 24
Mature sequence(if miRNA) 1 - UUGGCGUGUAUGUAUGGAUUGGCU - 24
Stem-loop(if miRNA) --   UU    -AA               UA   -              G  AUG     G CAA        ----       U   UU
  CCA  UCCA   AUGCAUGUCAAAUAU  GCC GAUUUGAAAAUUUU AA   UUCAU U   AAUGGUUU    AUUUUCA AGG  A
  |||  ||||   |||||||||||||||  ||| |||||||||||||| ||   ||||| |   ||||||||    ||||||| |||  A
  GGU  AGGU   UAUGUGCGGUUUAUA  UGG UUAAAUUUUUAAAA UU   AAGUG A   UUAUCAAA    UAAAGGU UCC  A
UC   -U    AUG               -C   A              G  --A     G ---        CACU       U   CC
Stem-loop sequence CCAUUUCCAAAAUGCAUGUCAAAUAUUAGCCGAUUUGAAAAUUUUGAAAUGUUCAUGUCAAAAUGGUUUAUUUUCAUAGGUUAAACCCCUUUGGAAAUUCACAAACUAUUAGGUGAAAUUGAAAAUUUUUAAAUUAGGUCAUAUUUGGCGUGUAUGUAUGGAUUGGCU