ncRNA ID | novel_lus_miR355 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold723:52035-52202 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGGCGUGUAUGUAUGGAUUGGCU - 24 |
Stem-loop(if miRNA) |
--   UU    -AA               UA   -              G  AUG     G CAA        ----       U   UU   CCA  UCCA   AUGCAUGUCAAAUAU  GCC GAUUUGAAAAUUUU AA   UUCAU U   AAUGGUUU    AUUUUCA AGG  A   |||  ||||   |||||||||||||||  ||| |||||||||||||| ||   ||||| |   ||||||||    ||||||| |||  A   GGU  AGGU   UAUGUGCGGUUUAUA  UGG UUAAAUUUUUAAAA UU   AAGUG A   UUAUCAAA    UAAAGGU UCC  A UC   -U    AUG               -C   A              G  --A     G ---        CACU       U   CC |
Stem-loop sequence | CCAUUUCCAAAAUGCAUGUCAAAUAUUAGCCGAUUUGAAAAUUUUGAAAUGUUCAUGUCAAAAUGGUUUAUUUUCAUAGGUUAAACCCCUUUGGAAAUUCACAAACUAUUAGGUGAAAUUGAAAAUUUUUAAAUUAGGUCAUAUUUGGCGUGUAUGUAUGGAUUGGCU |