ncRNA ID | novel_lus_miR354 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold717:70-250 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUGGGAAUGGCUAAAAAUUGAGG - 24 |
Stem-loop(if miRNA) |
--A                 U          CC      - G   U      UUACAA   -GAUG          ----UU     C  GCU    UUGGGAAUGGCUAAAAA UGAGGUUUCA  AUUGUA U CCU CAAAUA      AAU     UUAAAAAUAA      CUUAA AC   A    ||||||||||||||||| ||||||||||  |||||| | ||| ||||||      |||     ||||||||||      ||||| ||   A    AACCCUUACUGAUUUUU ACUUCAAAGU  UGACAU G GGA GUUUAU      UUG     AAUUUUUAUU      GAGUU UG   A UAC                 C          AA      U G   C      UACUAG   AGUUA          UAAAAU     A  ACA |
Stem-loop sequence | AUUGGGAAUGGCUAAAAAUUGAGGUUUCACCAUUGUAUGCCUUCAAAUAUUACAAAAUGAUGUUAAAAAUAAUUCUUAACACGCUAAAACAGUAUUGAGUAAAAUUUAUUUUUAAAUUGAGUUGAUCAUUAUUUGCAGGGGUUACAGUAAUGAAACUUCACUUUUUAGUCAUUCCCAACAU |