Search result

BaseInfo

ncRNA ID novel_lus_miR354
Species Linum usitatissimum
Class miRNA
Genome position scaffold717:70-250 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 24
Mature sequence(if miRNA) 1 - AUUGGGAAUGGCUAAAAAUUGAGG - 24
Stem-loop(if miRNA) --A                 U          CC      - G   U      UUACAA   -GAUG          ----UU     C  GCU
   UUGGGAAUGGCUAAAAA UGAGGUUUCA  AUUGUA U CCU CAAAUA      AAU     UUAAAAAUAA      CUUAA AC   A
   ||||||||||||||||| ||||||||||  |||||| | ||| ||||||      |||     ||||||||||      ||||| ||   A
   AACCCUUACUGAUUUUU ACUUCAAAGU  UGACAU G GGA GUUUAU      UUG     AAUUUUUAUU      GAGUU UG   A
UAC                 C          AA      U G   C      UACUAG   AGUUA          UAAAAU     A  ACA
Stem-loop sequence AUUGGGAAUGGCUAAAAAUUGAGGUUUCACCAUUGUAUGCCUUCAAAUAUUACAAAAUGAUGUUAAAAAUAAUUCUUAACACGCUAAAACAGUAUUGAGUAAAAUUUAUUUUUAAAUUGAGUUGAUCAUUAUUUGCAGGGGUUACAGUAAUGAAACUUCACUUUUUAGUCAUUCCCAACAU