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BaseInfo

ncRNA ID novel_lus_miR348
Species Linum usitatissimum
Class miRNA
Genome position scaffold1229:650-821 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996372
Length 24
Mature sequence(if miRNA) 149 - GACAUGCGUGUUGGAAAUGGCUAA - 172
Stem-loop(if miRNA) --       C      UA  C           U  CU  U     -G          CACC       A G   A  U   A  U G
  AGCCAUU CCAACA  CA GUCAAAUGUUA CC  UU GAAAA  UUUAAAUUUU    UCAAAAU U UCA UC CCA AG G U
  ||||||| ||||||  || ||||||||||| ||  || |||||  ||||||||||    ||||||| | ||| || ||| || | U
  UCGGUAA GGUUGU  GU CAGUUUAUAAU GG  AA CUUUU  AGGUUUAAAA    AGUUUUA G AGU AG GGU UC C A
AA       A      GC  A           C  CU  C     AA          AUAC       C G   A  -   A  - A
Stem-loop sequence AGCCAUUCCCAACAUACACGUCAAAUGUUAUCCCUUUUGAAAAGUUUAAAUUUUCACCUCAAAAUAUGUCAAUCUCCAAAGUGGUUAACCUAUGGGAAUGAGGCAUUUUGACAUAAAAAUUUGGAAAUUUUCCAAUCGGCUAAUAUUUGACAUGCGUGUUGGAAAUGGCUAA