ncRNA ID | novel_lus_miR348 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1229:650-821 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 149 - GACAUGCGUGUUGGAAAUGGCUAA - 172 |
Stem-loop(if miRNA) |
--       C      UA  C           U  CU  U     -G          CACC       A G   A  U   A  U G   AGCCAUU CCAACA  CA GUCAAAUGUUA CC  UU GAAAA  UUUAAAUUUU    UCAAAAU U UCA UC CCA AG G U   ||||||| ||||||  || ||||||||||| ||  || |||||  ||||||||||    ||||||| | ||| || ||| || | U   UCGGUAA GGUUGU  GU CAGUUUAUAAU GG  AA CUUUU  AGGUUUAAAA    AGUUUUA G AGU AG GGU UC C A AA       A      GC  A           C  CU  C     AA          AUAC       C G   A  -   A  - A |
Stem-loop sequence | AGCCAUUCCCAACAUACACGUCAAAUGUUAUCCCUUUUGAAAAGUUUAAAUUUUCACCUCAAAAUAUGUCAAUCUCCAAAGUGGUUAACCUAUGGGAAUGAGGCAUUUUGACAUAAAAAUUUGGAAAUUUUCCAAUCGGCUAAUAUUUGACAUGCGUGUUGGAAAUGGCUAA |