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BaseInfo

ncRNA ID novel_lus_miR342
Species Linum usitatissimum
Class miRNA
Genome position scaffold952:743-926 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 161 - AUGUUGGGAAUGGCUACAAAUUGA - 184
Stem-loop(if miRNA) --     U  U      UU        AC  C        AUC        UUUG     -AUAUU   A     -G  U      AAU   UU
  GAUUU UA GCCAUU  CAACAUGC  GU AAAUAUUA   GAUUUGGA    UUUAA      UGU AAAAU  GC AGUUUC   AGG  A
  ||||| || ||||||  ||||||||  || ||||||||   ||||||||    |||||      ||| |||||  || ||||||   |||
  UUAAA AU CGGUAA  GUUGUACG  CA UUUAUAAU   UUAAACUU    AAGUU      ACA UUUUG  CG UUAAAG   UCC  A
AG     C  -      GG        AA  A        GUA        UCAA     AAAAGU   G     AA  -      GUU   CC
Stem-loop sequence GAUUUUUAUGCCAUUUUCAACAUGCACGUCAAAUAUUAAUCGAUUUGGAUUUGUUUAAAUAUUUGUAAAAAUGGCUAGUUUCAAUAGGUUAACCCCUUUGGAAAUUGCAAGUUUUGACAUGAAAAUUGAAAACUUUCAAAUUAUGUAAUAUUUAACAAGCAUGUUGGGAAUGGCUACAAAUUGA