ncRNA ID | novel_lus_miR342 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold952:743-926 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 161 - AUGUUGGGAAUGGCUACAAAUUGA - 184 |
Stem-loop(if miRNA) |
--     U  U      UU        AC  C        AUC        UUUG     -AUAUU   A     -G  U      AAU   UU   GAUUU UA GCCAUU  CAACAUGC  GU AAAUAUUA   GAUUUGGA    UUUAA      UGU AAAAU  GC AGUUUC   AGG  A   ||||| || ||||||  ||||||||  || ||||||||   ||||||||    |||||      ||| |||||  || ||||||   |||   UUAAA AU CGGUAA  GUUGUACG  CA UUUAUAAU   UUAAACUU    AAGUU      ACA UUUUG  CG UUAAAG   UCC  A AG     C  -      GG        AA  A        GUA        UCAA     AAAAGU   G     AA  -      GUU   CC |
Stem-loop sequence | GAUUUUUAUGCCAUUUUCAACAUGCACGUCAAAUAUUAAUCGAUUUGGAUUUGUUUAAAUAUUUGUAAAAAUGGCUAGUUUCAAUAGGUUAACCCCUUUGGAAAUUGCAAGUUUUGACAUGAAAAUUGAAAACUUUCAAAUUAUGUAAUAUUUAACAAGCAUGUUGGGAAUGGCUACAAAUUGA |