ncRNA ID | novel_lus_miR338 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold917:810126-810278 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGAAUAACAGCAGAGUAACACC - 24 |
Stem-loop(if miRNA) |
--             AG     CACCAGAC   AG       A       C    C    GG   A     UCAAUGAGAG   AAGGAAUAACAGC  AGUAA        ACU  CGAUUAA GUGAUUU CGAC UUGA  UCC CUAAU          A   |||||||||||||  |||||        |||  ||||||| ||||||| |||| ||||  ||| |||||          A   UUCCUUAUUGUCG  UUAUU        UGA  GCUAAUU CACUAAA GCUG AACU  AGG GAUUA          A AC             CU     -------A   CU       A       A    A    --   -     UUAUAAAGGG |
Stem-loop sequence | AAGGAAUAACAGCAGAGUAACACCAGACACUAGCGAUUAAAGUGAUUUCCGACCUUGAGGUCCACUAAUUCAAUGAGAGAAAGGGAAAUAUUAUUAGGGAUCAAAGUCGAAAAUCACAUUAAUCGUCAGUAUUAUUUCGCUGUUAUUCCUUCA |