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BaseInfo

ncRNA ID novel_lus_miR338
Species Linum usitatissimum
Class miRNA
Genome position scaffold917:810126-810278 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 1 - AAGGAAUAACAGCAGAGUAACACC - 24
Stem-loop(if miRNA) --             AG     CACCAGAC   AG       A       C    C    GG   A     UCAAUGAGAG
  AAGGAAUAACAGC  AGUAA        ACU  CGAUUAA GUGAUUU CGAC UUGA  UCC CUAAU          A
  |||||||||||||  |||||        |||  ||||||| ||||||| |||| ||||  ||| |||||          A
  UUCCUUAUUGUCG  UUAUU        UGA  GCUAAUU CACUAAA GCUG AACU  AGG GAUUA          A
AC             CU     -------A   CU       A       A    A    --   -     UUAUAAAGGG
Stem-loop sequence AAGGAAUAACAGCAGAGUAACACCAGACACUAGCGAUUAAAGUGAUUUCCGACCUUGAGGUCCACUAAUUCAAUGAGAGAAAGGGAAAUAUUAUUAGGGAUCAAAGUCGAAAAUCACAUUAAUCGUCAGUAUUAUUUCGCUGUUAUUCCUUCA