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BaseInfo

ncRNA ID novel_lus_miR336
Species Linum usitatissimum
Class miRNA
Genome position scaffold866:342658-342863 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 1 - UUGACAUGUAUGUUGGGAAUGGCU - 24
Stem-loop(if miRNA) --                       -    CAUUG        C    -UUAA     UC       A  UAC     --G      A     UC   ACAUCAUG
  UUGACAUGUAUGUUGGGAAUGGC UAAA     AGGUUUCA CAUG     GCCCU  AAAUAAU GG   AUGAA   UUAGAU AUAUU  UUC        A
  ||||||||||||||||||||||| ||||     |||||||| ||||     |||||  ||||||| ||   |||||   |||||| |||||  |||
  AACUGUACGUACAACCUUUAUUG AUUU     UUCAAAGU GUAU     UGGGA  UUUAUUA CC   UACUU   AAUUUA UAUAA  GAG        A
UA                       U    -UCGA        A    UACUG     -U       A  UAA     AAA      G     UU   CUAUAACA
Stem-loop sequence UUGACAUGUAUGUUGGGAAUGGCUAAACAUUGAGGUUUCACCAUGUUAAGCCCUUCAAAUAAUAGGUACAUGAAGUUAGAUAAUAUUUCUUCACAUCAUGAAACAAUAUCGAGUUAAUAUGAUUUAAAAAUUCAUAAUCCAAUUAUUUUAGGGUGUCAUUAUGAUGAAACUUAGCUUUUAUGUUAUUUCCAACAUGCAUGUCAAAU