ncRNA ID | novel_lus_miR336 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold866:342658-342863 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGACAUGUAUGUUGGGAAUGGCU - 24 |
Stem-loop(if miRNA) |
--                       -    CAUUG        C    -UUAA     UC       A  UAC     --G      A     UC   ACAUCAUG   UUGACAUGUAUGUUGGGAAUGGC UAAA     AGGUUUCA CAUG     GCCCU  AAAUAAU GG   AUGAA   UUAGAU AUAUU  UUC        A   ||||||||||||||||||||||| ||||     |||||||| ||||     |||||  ||||||| ||   |||||   |||||| |||||  |||   AACUGUACGUACAACCUUUAUUG AUUU     UUCAAAGU GUAU     UGGGA  UUUAUUA CC   UACUU   AAUUUA UAUAA  GAG        A UA                       U    -UCGA        A    UACUG     -U       A  UAA     AAA      G     UU   CUAUAACA |
Stem-loop sequence | UUGACAUGUAUGUUGGGAAUGGCUAAACAUUGAGGUUUCACCAUGUUAAGCCCUUCAAAUAAUAGGUACAUGAAGUUAGAUAAUAUUUCUUCACAUCAUGAAACAAUAUCGAGUUAAUAUGAUUUAAAAAUUCAUAAUCCAAUUAUUUUAGGGUGUCAUUAUGAUGAAACUUAGCUUUUAUGUUAUUUCCAACAUGCAUGUCAAAU |