ncRNA ID | novel_lus_miR322 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold3363:206-415 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611435;ERR906802 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AUUUGGCAUGCAUGUUGGAAAUG - 23 |
Stem-loop(if miRNA) |
--       A  C       A     C      GACAA     AU U  GAAA        C  A   A       C       A  GA     ---  U  A  UU   AUUUGGC UG AUGUUGG AAUGG UAAAAA     GUUUC  C UG    UCCCUUUA AU AUG UCAAAUG AUUUAAA AU  AUUUU   AC CG UA  A   ||||||| || ||||||| ||||| ||||||     |||||  | ||    |||||||| || ||| ||||||| ||||||| ||  |||||   || || ||   UAAACCG AC UACAAUC UUAUC AUUUUU     CAAAG  G AC    AGGGAAGU UA UAU AGUUUAC UGAAUUU UA  UAAAG   UG GC AU  U UA       C  A       C     A      AACUC     CG U  AACG        U  A   C       U       A  -A     AAU  U  G  UU |
Stem-loop sequence | AUUUGGCAUGCAUGUUGGAAAUGGCUAAAAAGACAAGUUUCAUCUUGGAAAUCCCUUUACAUAAUGAUCAAAUGCAUUUAAAAAUGAAUUUUACUCGAUAUUAUUUUAGCGUGUUAAGAAAUAAUAUUUAAGUUCAUUUGACUAUAAUUUGAAGGGAGCAACAUGGCGAAACCUCAAUUUUUAACUAUUCCUAACAUACACGCCAAAUAU |