ncRNA ID | novel_lus_miR320 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold809:687-854 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 145 - AAGCGUGUAUGUUGGGAAUGGCUA - 168 |
Stem-loop(if miRNA) |
--                    CA          G            GAA         GUUAU   G UU    UCUAUAGGUGUUC   GCCAUUUCCAACAUGCAUGU  AAUAUUAGCC AUUUGAAAAUUU   AAUUUUCAU     AAU G  CAUU             G   ||||||||||||||||||||  |||||||||| ||||||||||||   |||||||||     ||| |  ||||             A   CGGUAAGGGUUGUAUGUGCG  UUAUAAUCGG UAAAUUUUUAAA   UUAAAAGUG     ACU U  UUAA             U AU                    AA          G            --G         ----G   - --    ACAGUUAAAGGUU |
Stem-loop sequence | GCCAUUUCCAACAUGCAUGUCAAAUAUUAGCCGAUUUGAAAAUUUGAAAAUUUUCAUGUUAUAAUGGUUCAUUUCUAUAGGUGUUCGAUUUGGAAAUUGACAAAUUUUCAGGUGAAAAUUGAAAUUUUUAAAUGGGCUAAUAUUAAGCGUGUAUGUUGGGAAUGGCUA |