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BaseInfo

ncRNA ID novel_lus_miR319
Species Linum usitatissimum
Class miRNA
Genome position scaffold773:42475-42650 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 153 - AUGCAUGUUGGAAAUGGCUAAGAA - 176
Stem-loop(if miRNA) --     A    C           AU       A  C A   G         -C      CA  CC                 A   GG
  UUUAG CAUU CCAACAUGCAU  CAAAUAU AG C AUU GAAAAUUUU  AAUUUU  UG  AAAAUUGUUAAUUUUCA AGG  U
  ||||| |||| |||||||||||  ||||||| || | ||| |||||||||  ||||||  ||  ||||||||||||||||| |||
  GAAUC GUAA GGUUGUACGUA  GUUUAUA UC G UAA CUUUUAAAA  UUAAAA  AC  UUUUAGCAGUUAAAAGU UCC  U
AA     G    A           -C       A  A C   A         CU      CA  UC                 A   AA
Stem-loop sequence UUUAGACAUUCCCAACAUGCAUAUCAAAUAUAAGCCAAUUGGAAAAUUUUCAAUUUUCAUGCCAAAAUUGUUAAUUUUCAAAGGGGUUAACCUAUGAAAAUUGACGAUUUUCUCAACAAAAUUUCAAAAUUUUCAAAUCGACUAAUAUUUGCAUGCAUGUUGGAAAUGGCUAAGAA