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BaseInfo

ncRNA ID novel_lus_miR316
Species Linum usitatissimum
Class miRNA
Genome position scaffold754:97799-98020 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371;SRR2996372
Length 24
Mature sequence(if miRNA) 199 - AUCGACUAAUAUUUGACAUGCAUA - 222
Stem-loop(if miRNA) --    A         G  A     A    A         AAAAAUCAA     U   C    AU    A         A CG  C U           AA     CUC   G
  AUCG CUAAUAUUU AC UGCAU UUGG AAUGGUUAA         GUUUC UUA GUUA  CCCU UAAAUAAUG U  AA G GGUUAAAAAUA  UUUUA   GCA G
  |||| ||||||||| || ||||| |||| |||||||||         ||||| ||| ||||  |||| ||||||||| |  || | |||||||||||  |||||   |||
  UAGC GGUUAUAAA UG AUGUA AACC UUACCGAUU         CAAAG GGU CAAU  GGGA GUUUAUUAU G  UU C UCAAUUUUUAU  AAAGU   UGU C
UU    C         A  A     C    C         -AUUAACUC     U   A    AC    A         C AU  A U           AA     ---   A
Stem-loop sequence AUCGACUAAUAUUUGACAUGCAUAUUGGAAAUGGUUAAAAAAAUCAAGUUUCUUUACGUUAAUCCCUAUAAAUAAUGAUCGAACGUGGUUAAAAAUAAAUUUUACUCGCAGGCAUGUUGAAAAAUAUUUUUAACUUCAUUUAGCUAUUAUUUGAAGGGCAUAACAUGGUGAAACCUCAAUUAUUAGCCAUUCCCAACAUGUAAGUAAAAUAUUGGCCGAUUU