ncRNA ID | novel_lus_miR316 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold754:97799-98020 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371;SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 199 - AUCGACUAAUAUUUGACAUGCAUA - 222 |
Stem-loop(if miRNA) |
--    A         G  A     A    A         AAAAAUCAA     U   C    AU    A         A CG  C U           AA     CUC   G   AUCG CUAAUAUUU AC UGCAU UUGG AAUGGUUAA         GUUUC UUA GUUA  CCCU UAAAUAAUG U  AA G GGUUAAAAAUA  UUUUA   GCA G   |||| ||||||||| || ||||| |||| |||||||||         ||||| ||| ||||  |||| ||||||||| |  || | |||||||||||  |||||   |||   UAGC GGUUAUAAA UG AUGUA AACC UUACCGAUU         CAAAG GGU CAAU  GGGA GUUUAUUAU G  UU C UCAAUUUUUAU  AAAGU   UGU C UU    C         A  A     C    C         -AUUAACUC     U   A    AC    A         C AU  A U           AA     ---   A |
Stem-loop sequence | AUCGACUAAUAUUUGACAUGCAUAUUGGAAAUGGUUAAAAAAAUCAAGUUUCUUUACGUUAAUCCCUAUAAAUAAUGAUCGAACGUGGUUAAAAAUAAAUUUUACUCGCAGGCAUGUUGAAAAAUAUUUUUAACUUCAUUUAGCUAUUAUUUGAAGGGCAUAACAUGGUGAAACCUCAAUUAUUAGCCAUUCCCAACAUGUAAGUAAAAUAUUGGCCGAUUU |