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BaseInfo

ncRNA ID novel_lus_miR290
Species Linum usitatissimum
Class miRNA
Genome position scaffold413:881236-881384 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371;ERR1611433;SRR2996372;ERR1611439
Length 21
Mature sequence(if miRNA) 129 - UUGACAGAAGAUAGAGAGCAC - 149
Stem-loop(if miRNA) --         G         U  -  UUCAUC    ----   G         --       A    UU  -CUA   U
  GCUCUCUAU CUUCUGUCA CA CC      AUCC    UUA CUUUUUCCU  AUAUUCA UGCG  CA    UGU U
  ||||||||| ||||||||| || ||      ||||    ||| |||||||||  ||||||| ||||  ||    |||
  CGAGAGAUA GAAGACAGU GU GG      UAGG    GGU GAGAAAGGA  UAUAAGU GUGU  GU    ACA A
CA         -         U  U  -UUAUA    UUUA   G         AG       -    CU  AUCG   A
Stem-loop sequence GCUCUCUAUGCUUCUGUCAUCACCUUCAUCAUCCUUAGCUUUUUCCUAUAUUCAAUGCGUUCACUAUGUUUAAACAGCUAUGUCUGUGUGAAUAUGAAGGAAAGAGGUGGAUUUGGAUAUAUUGGUUGUUGACAGAAGAUAGAGAGCAC