ncRNA ID | novel_lus_miR290 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold413:881236-881384 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371;ERR1611433;SRR2996372;ERR1611439 |
Length | 21 |
Mature sequence(if miRNA) | 129 - UUGACAGAAGAUAGAGAGCAC - 149 |
Stem-loop(if miRNA) |
--         G         U  -  UUCAUC    ----   G         --       A    UU  -CUA   U   GCUCUCUAU CUUCUGUCA CA CC      AUCC    UUA CUUUUUCCU  AUAUUCA UGCG  CA    UGU U   ||||||||| ||||||||| || ||      ||||    ||| |||||||||  ||||||| ||||  ||    |||   CGAGAGAUA GAAGACAGU GU GG      UAGG    GGU GAGAAAGGA  UAUAAGU GUGU  GU    ACA A CA         -         U  U  -UUAUA    UUUA   G         AG       -    CU  AUCG   A |
Stem-loop sequence | GCUCUCUAUGCUUCUGUCAUCACCUUCAUCAUCCUUAGCUUUUUCCUAUAUUCAAUGCGUUCACUAUGUUUAAACAGCUAUGUCUGUGUGAAUAUGAAGGAAAGAGGUGGAUUUGGAUAUAUUGGUUGUUGACAGAAGAUAGAGAGCAC |