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BaseInfo

ncRNA ID novel_lus_miR289
Species Linum usitatissimum
Class miRNA
Genome position scaffold4059:107-307 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 178 - GACAUGCAUGUUGGGAGUGGCUAA - 201
Stem-loop(if miRNA) --G                        UAUUA        -  A  UUA    G  C         CAA      G       -AU      ----AAAUG  C
   ACAUGCAUGUUGGGAGUGGCUAAA     AAGUUUCA CC UG   AGCC UU AAAUAAUAG   AAUGAA UUAAAAA   AUUUUG         GC U
   ||||||||||||||||||||||||     |||||||| || ||   |||| || |||||||||   |||||| |||||||   ||||||         || A
   UGUAUGUACAACCUUUAUCGGUUU     UUCAAAGU GG AC   UUGG AA UUUAUUAUC   UUACUU AAUUUUU   UAAAAU         CG A
AAA                        UUCAG        A  -  -CA    G  A         ACC      G       AUU      GAGCUAUAA  C
Stem-loop sequence GACAUGCAUGUUGGGAGUGGCUAAAUAUUAAAGUUUCACCAUGUUAAGCCGUUCAAAUAAUAGCAAAAUGAAGUUAAAAAAUAUUUUGAAAUGGCCUAACGCAAUAUCGAGUAAAAUUUAUUUUUAAGUUCAUUCCACUAUUAUUUAAAGGGUUACCAGGAUGAAACUUGACUUUUUGGCUAUUUCCAACAUGUAUGUAAA