ncRNA ID | novel_lus_miR289 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold4059:107-307 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 178 - GACAUGCAUGUUGGGAGUGGCUAA - 201 |
Stem-loop(if miRNA) |
--G                        UAUUA        -  A  UUA    G  C         CAA      G       -AU      ----AAAUG  C    ACAUGCAUGUUGGGAGUGGCUAAA     AAGUUUCA CC UG   AGCC UU AAAUAAUAG   AAUGAA UUAAAAA   AUUUUG         GC U    ||||||||||||||||||||||||     |||||||| || ||   |||| || |||||||||   |||||| |||||||   ||||||         || A    UGUAUGUACAACCUUUAUCGGUUU     UUCAAAGU GG AC   UUGG AA UUUAUUAUC   UUACUU AAUUUUU   UAAAAU         CG A AAA                        UUCAG        A  -  -CA    G  A         ACC      G       AUU      GAGCUAUAA  C |
Stem-loop sequence | GACAUGCAUGUUGGGAGUGGCUAAAUAUUAAAGUUUCACCAUGUUAAGCCGUUCAAAUAAUAGCAAAAUGAAGUUAAAAAAUAUUUUGAAAUGGCCUAACGCAAUAUCGAGUAAAAUUUAUUUUUAAGUUCAUUCCACUAUUAUUUAAAGGGUUACCAGGAUGAAACUUGACUUUUUGGCUAUUUCCAACAUGUAUGUAAA |