ncRNA ID | novel_lus_miR274 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold34:809925-810096 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371;SRR2996369 |
Length | 24 |
Mature sequence(if miRNA) | 149 - GACAUGUAUGUUGGAAAUGGCUAA - 172 |
Stem-loop(if miRNA) |
---GA    C      A                  AU           GA           G      U   CA       AAA   U      CAUU CUAACA GCAUGUCAAAUAUUAGUU  UUUGAAAAUUU  AAAUUUUUAUG UAAAAU GGU  AUUUCCA   AGG U      |||| |||||| ||||||||||||||||||  |||||||||||  ||||||||||| |||||| |||  |||||||   |||      GUAA GGUUGU UGUACAGUUUAUAAUCGG  AAACUUUUAAA  UUUAAAAGUAU GUUUUA CCG  UAAAGGU   UCC A AAUCG    A      A                  CU           AC           G      -   AG       --A   A |
Stem-loop sequence | GACAUUCCUAACAAGCAUGUCAAAUAUUAGUUAUUUUGAAAAUUUGAAAAUUUUUAUGGUAAAAUUGGUCAAUUUCCAAAAAGGUUAACCUAUGGAAAUGAGCCAUUUUGGUAUGAAAAUUUCAAAAUUUUCAAAUCGGCUAAUAUUUGACAUGUAUGUUGGAAAUGGCUAA |