ncRNA ID | novel_lus_miR253 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold2806:194-389 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 173 - AUGGAUGUUGGAAAUGGCUAAAAA - 196 |
Stem-loop(if miRNA) |
--A  G      G             GUCAAGU         G   C  CUA        -   C     UA       AUCA      G  G          UG AUGUUG AAAUGGCUAAAAA       UUUAUCAUG UAA CC   UAAAUAAU GGU AAUUG  UUUAAAA    AUUUUA AA AUAUUGU    || |||||| |||||||||||||       ||||||||| ||| ||   |||||||| ||| |||||  |||||||    |||||| || ||||||U    AU UACAAC UUUACUGAUUUUU       AAGUGGUAC AUU GG   GUUUAUUA CCG UUAGU  AAGUUUU    UGAAGU UU UGUGAUU UGC  G      A             AACUCCC         A   A  UAA        U   U     UC       --AA      A  G       |
Stem-loop sequence | AUGGAUGUUGGAAAUGGCUAAAAAGUCAAGUUUUAUCAUGGUAACCCCUAUAAAUAAUGGUCAAUUGUAUUUAAAAAUCAAUUUUAGAAGAUAUUGUUUUAGUGUGUUAUGAAGUAAUUUUGAACUUGAUUUGCCUAUUAUUUGAAUGGAUUAACAUGGUGAACCCUCAAUUUUUAGUCAUUUACAACAUGUACGU |