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BaseInfo

ncRNA ID novel_lus_miR253
Species Linum usitatissimum
Class miRNA
Genome position scaffold2806:194-389 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 173 - AUGGAUGUUGGAAAUGGCUAAAAA - 196
Stem-loop(if miRNA) --A  G      G             GUCAAGU         G   C  CUA        -   C     UA       AUCA      G  G      
   UG AUGUUG AAAUGGCUAAAAA       UUUAUCAUG UAA CC   UAAAUAAU GGU AAUUG  UUUAAAA    AUUUUA AA AUAUUGU
   || |||||| |||||||||||||       ||||||||| ||| ||   |||||||| ||| |||||  |||||||    |||||| || ||||||U
   AU UACAAC UUUACUGAUUUUU       AAGUGGUAC AUU GG   GUUUAUUA CCG UUAGU  AAGUUUU    UGAAGU UU UGUGAUU
UGC  G      A             AACUCCC         A   A  UAA        U   U     UC       --AA      A  G      
Stem-loop sequence AUGGAUGUUGGAAAUGGCUAAAAAGUCAAGUUUUAUCAUGGUAACCCCUAUAAAUAAUGGUCAAUUGUAUUUAAAAAUCAAUUUUAGAAGAUAUUGUUUUAGUGUGUUAUGAAGUAAUUUUGAACUUGAUUUGCCUAUUAUUUGAAUGGAUUAACAUGGUGAACCCUCAAUUUUUAGUCAUUUACAACAUGUACGU