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BaseInfo

ncRNA ID novel_lus_miR246
Species Linum usitatissimum
Class miRNA
Genome position scaffold25:1772099-1772291 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 22
Mature sequence(if miRNA) 172 - UAGAGUUGAGAGGGAUUGUAGA - 193
Stem-loop(if miRNA) --C    -     C          UUAACUUUCUUU     U    U      AUUCCUAUG     UUUA          UUCA      C     AAGGU
   ACAA CCCUC CAACUCUAAC            CACUA UCUU ACUCAA         UUUCU    GGAAUUAUGA    UGUUGC AAACC     A
   |||| ||||| ||||||||||            ||||| |||| ||||||         |||||    ||||||||||    |||||| |||||     U
   UGUU GGGAG GUUGAGAUUG            GUGAU AGAG UGAGUU         AAAGA    CCUUAAUACU    ACAACG UUUGG     A
AGA    A     A          -UAUACAAAAAU     U    U      --------A     --UG          CAAA      C     AUUGG
Stem-loop sequence CACAACCCUCCCAACUCUAACUUAACUUUCUUUCACUAUUCUUUACUCAAAUUCCUAUGUUUCUUUUAGGAAUUAUGAUUCAUGUUGCCAAACCAAGGUAUAGGUUAGGUUUCGCAACAAAACUCAUAAUUCCGUAGAAAAUUGAGUUGAGAUUAGUGUAAAAACAUAUGUUAGAGUUGAGAGGGAUUGUAGA