ncRNA ID | novel_lus_miR246 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold25:1772099-1772291 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 22 |
Mature sequence(if miRNA) | 172 - UAGAGUUGAGAGGGAUUGUAGA - 193 |
Stem-loop(if miRNA) |
--C    -     C          UUAACUUUCUUU     U    U      AUUCCUAUG     UUUA          UUCA      C     AAGGU    ACAA CCCUC CAACUCUAAC            CACUA UCUU ACUCAA         UUUCU    GGAAUUAUGA    UGUUGC AAACC     A    |||| ||||| ||||||||||            ||||| |||| ||||||         |||||    ||||||||||    |||||| |||||     U    UGUU GGGAG GUUGAGAUUG            GUGAU AGAG UGAGUU         AAAGA    CCUUAAUACU    ACAACG UUUGG     A AGA    A     A          -UAUACAAAAAU     U    U      --------A     --UG          CAAA      C     AUUGG |
Stem-loop sequence | CACAACCCUCCCAACUCUAACUUAACUUUCUUUCACUAUUCUUUACUCAAAUUCCUAUGUUUCUUUUAGGAAUUAUGAUUCAUGUUGCCAAACCAAGGUAUAGGUUAGGUUUCGCAACAAAACUCAUAAUUCCGUAGAAAAUUGAGUUGAGAUUAGUGUAAAAACAUAUGUUAGAGUUGAGAGGGAUUGUAGA |