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BaseInfo

ncRNA ID novel_lus_miR243
Species Linum usitatissimum
Class miRNA
Genome position scaffold2381:340-476 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371;SRR2996372;SRR2996369
Length 24
Mature sequence(if miRNA) 1 - AAAUGGGCUAAUAUUUCACGUGUA - 24
Stem-loop(if miRNA) --     C     C  AU G         -   G  A      GU      -G   C       U   U
  CAUGU AAAUA UA  C AUUUGAAGA UUU AA UUUCAU  CAAAAU  GUU AUUUCCA AGG G
  ||||| ||||| ||  | ||||||||| ||| || ||||||  ||||||  ||| ||||||| ||| U
  GUGCA UUUAU AU  G UAAAUUUUU AAG UU AAAGUA  GUUUUA  CAG UAAAGGU UCC U
AU     C     A  CG G         C   A  A      GU      AA   U       U   C
Stem-loop sequence CAUGUCAAAUACUAAUCGAUUUGAAGAUUUGAAAUUUCAUGUCAAAAUGGUUCAUUUCCAUAGGUGUUCCCUUUGGAAAUUGACAAAUUUUGUGAUGAAAAUUAGAACUUUUUAAAUGGGCUAAUAUUUCACGUGUA