ncRNA ID | novel_lus_miR241 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold2325:216-420 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGACGGUGUAUGUUGGGAAUGGCU - 24 |
Stem-loop(if miRNA) |
--     G                       UUGAU      CC   -    G  C  C         C        GUAAAAACA     CUUAUCACGCUAAA   UGACG UGUAUGUUGGGAAUGGCUAAAAA     GUUUCA  AUG UGAU CC UU AAAUAAUGG CAAAUGAA         UAUUU              A   ||||| |||||||||||||||||||||||     ||||||  ||| |||| || || ||||||||| ||||||||         |||||   ACUGC ACGUACAACCUUUACCGAUUUUU     CAAAGU  UGC AUUA GG AA UUUAUUACC GUUUACUU         UAGUU              U AA     -                       CUGUU      AA   U    -  U  A         A        --AACUUUU     AAAAUGAGCUAUAA |
Stem-loop sequence | UGACGGUGUAUGUUGGGAAUGGCUAAAAAUUGAUGUUUCACCAUGUGAUGCCCUUCAAAUAAUGGCCAAAUGAAGUAAAAACAUAUUUCUUAUCACGCUAAAAUAAUAUCGAGUAAAAUUGAUUUUUCAAUUCAUUUGACCAUUAUUUAAAUGGAUUAUCGUAAUGAAACUUGUCUUUUUAGCCAUUUCCAACAUGCACGUCAAA |