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BaseInfo

ncRNA ID novel_lus_miR241
Species Linum usitatissimum
Class miRNA
Genome position scaffold2325:216-420 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 1 - UGACGGUGUAUGUUGGGAAUGGCU - 24
Stem-loop(if miRNA) --     G                       UUGAU      CC   -    G  C  C         C        GUAAAAACA     CUUAUCACGCUAAA
  UGACG UGUAUGUUGGGAAUGGCUAAAAA     GUUUCA  AUG UGAU CC UU AAAUAAUGG CAAAUGAA         UAUUU              A
  ||||| |||||||||||||||||||||||     ||||||  ||| |||| || || ||||||||| ||||||||         |||||
  ACUGC ACGUACAACCUUUACCGAUUUUU     CAAAGU  UGC AUUA GG AA UUUAUUACC GUUUACUU         UAGUU              U
AA     -                       CUGUU      AA   U    -  U  A         A        --AACUUUU     AAAAUGAGCUAUAA
Stem-loop sequence UGACGGUGUAUGUUGGGAAUGGCUAAAAAUUGAUGUUUCACCAUGUGAUGCCCUUCAAAUAAUGGCCAAAUGAAGUAAAAACAUAUUUCUUAUCACGCUAAAAUAAUAUCGAGUAAAAUUGAUUUUUCAAUUCAUUUGACCAUUAUUUAAAUGGAUUAUCGUAAUGAAACUUGUCUUUUUAGCCAUUUCCAACAUGCACGUCAAA