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BaseInfo

ncRNA ID novel_lus_miR240
Species Linum usitatissimum
Class miRNA
Genome position scaffold2324:36922-37072 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 128 - UUUACAUGCAUGUUGGAAAUGGCU - 151
Stem-loop(if miRNA) --     CU      A     C   UAUG   UA      AAAA   CA   C    U       -        UGC
  CCAUU  CAACAU CAUGU AAA    AGU  AUUUAA    UUU  UGU AAAA UGGUCAA UUUCCGUA   U
  |||||  |||||| ||||| |||    |||  ||||||    |||  ||| |||| ||||||| ||||||||
  GGUAA  GUUGUA GUACA UUU    UCG  UAAAUU    AAA  ACA UUUU ACCAGUU AAAGGUGU   A
UC     AG      C     U   UUAA   GC      -AAA   AA   -    U       U        UAU
Stem-loop sequence CCAUUCUCAACAUACAUGUCAAAUAUGAGUUAAUUUAAAAAAUUUCAUGUCAAAAUUGGUCAAUUUCCGUAUGCUAUAUUGUGGAAAUUUGACCAUUUUUACAAAAAAAAAUUAAAUCGGCUAAUUUUUUACAUGCAUGUUGGAAAUGGCU